RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 PCDHA8Q9Y5H6 950 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 SMCO2A6NFE2 343 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 FIBPO43427 364 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 B4GALT4O60513 344 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 GGPS1O95749 300 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 AKAP17AQ02040 695 aaKnown RBP16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 MLXIPQ9HAP2 919 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 SCN10AQ9Y5Y9 1956 aa16.25■□□□□ 0.19
IGHV3-48-201ENST00000390624 SZT2Q5T011 3432 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 SCG2P13521 617 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 IFNAR1P17181 557 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 UBA1P22314 1058 aaKnown RBP16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 ADCY7P51828 1080 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 FPGSQ05932 587 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 NEDD9Q14511 834 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 NTRK3Q16288 839 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 FAM47CQ5HY64 1035 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 NLRX1Q86UT6 975 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 CDHR1Q96JP9 859 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 LAMA2P24043 3122 aaKnown RBP16.24■□□□□ 0.19
IGHV3-48-201ENST00000390624 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 CHMP4BP1P59074 171 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 SHHQ15465 462 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 PKN1Q16512 942 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 TMEM199Q8N511 208 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 KAT2BQ92831 832 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 PHKBQ93100 1093 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 SENP7Q9BQF6 1050 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 KATNAL1Q9BW62 490 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 RNF26Q9BY78 433 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 HIPK3Q9H422 1215 aa16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
IGHV3-48-201ENST00000390624 MAFGO15525 162 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 SORBS3O60504 671 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 SEMA3FQ13275 785 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 METTL7BQ6UX53 244 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 CYFIP1Q7L576 1253 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 GIMAP8Q8ND71 665 aaPredicted RBP16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 GPRASP2Q96D09 838 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 LARP6Q9BRS8 491 aaKnown RBP16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
IGHV3-48-201ENST00000390624 ESYT2A0FGR8 921 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 NOP56O00567 594 aaKnown RBP16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 SOX1O00570 391 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 CPLX1O14810 134 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 ITGB5P18084 799 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 CYP2C18P33260 490 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 PSEN2P49810 448 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 AP3B2Q13367 1082 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 PPIGQ13427 754 aaKnown RBP eCLIP16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 SESTD1Q86VW0 696 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 PPP1R13LQ8WUF5 828 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 ZMYND12Q9H0C1 365 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 C6orf50Q9HD87 102 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 UBIAD1Q9Y5Z9 338 aa16.21■□□□□ 0.19
IGHV3-48-201ENST00000390624 HAS3O00219 553 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 PPFIA3O75145 1194 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 SEC24BO95487 1268 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 F2P00734 622 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 CSF2RAP15509 400 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 GNA11P29992 359 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 EPHB4P54760 987 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 STK3Q13188 491 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 MTMR1Q13613 665 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 MFSD10Q14728 455 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 KIAA0753Q2KHM9 967 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 CPLX2Q6PUV4 134 aaKnown RBP16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 C7orf31Q8N865 590 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 LRCH3Q96II8 777 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 ANO3Q9BYT9 981 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 JADE2Q9NQC1 790 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 NOD1Q9Y239 953 aa16.2■□□□□ 0.18
IGHV3-48-201ENST00000390624 ZNF286BP0CG31 522 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 CYP2C9P11712 490 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms