RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 LRRC8DQ7L1W4 858 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 ADGRF4Q8IZF3 695 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 NSUN6Q8TEA1 469 aaKnown RBP8.22□□□□□ -1.09
TRAV27-201ENST00000390457 FAM122AQ96E09 287 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 MPHOSPH6Q99547 160 aaKnown RBP8.22□□□□□ -1.09
TRAV27-201ENST00000390457 RAD9AQ99638 391 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 TOMM22Q9NS69 142 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 HDAC6Q9UBN7 1215 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 ABCB11O95342 1321 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 NEDD4P46934 1319 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 CCDC171Q6TFL3 1326 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 ZNF318Q5VUA4 2279 aa8.22□□□□□ -1.09
TRAV27-201ENST00000390457 MYH7BA7E2Y1 1941 aa8.21□□□□□ -1.09
TRAV27-201ENST00000390457 MICAL3Q7RTP6 2002 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 ABHD14A-ACY1A0A1B0GW23 586 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 LINC01553A4QN01 128 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 PI4K2BG5E9Z4 385 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 EIF3JO75822 258 aaKnown RBP8.21□□□□□ -1.1
TRAV27-201ENST00000390457 NR3C2P08235 984 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 HOXC8P31273 242 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 PSEN2P49810 448 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 NT5C2P49902 561 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 HSD17B4P51659 736 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 PTK7Q13308 1070 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 HDAC1Q13547 482 aaPredicted RBP8.21□□□□□ -1.1
TRAV27-201ENST00000390457 STXBP2Q15833 593 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 CDC37Q16543 378 aaPredicted RBP8.21□□□□□ -1.1
TRAV27-201ENST00000390457 DGKDQ16760 1214 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 QRICH1Q2TAL8 776 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 SEPT14Q6ZU15 432 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 CCDC155Q8N6L0 562 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 GDPD5Q8WTR4 605 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 ESR2Q92731 530 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 MTMR8Q96EF0 704 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 TGS1Q96RS0 853 aaKnown RBP8.21□□□□□ -1.1
TRAV27-201ENST00000390457 RMDN3Q96TC7 470 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 JMJD4Q9H9V9 463 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 ZDBF2Q9HCK1 2354 aa8.21□□□□□ -1.1
TRAV27-201ENST00000390457 BAZ2BQ9UIF8 2168 aaKnown RBP8.21□□□□□ -1.1
TRAV27-201ENST00000390457 WDR87Q6ZQQ6 2873 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 EFCAB14O75071 495 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 KCNJ6P48051 423 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 HTRA4P83105 476 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 ZNF200P98182 395 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 MFSD10Q14728 455 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 SLC35G1Q2M3R5 365 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 ZNF618Q5T7W0 954 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 STOX1Q6ZVD7 989 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 CHST3Q7LGC8 479 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 FAM178BQ8IXR5 827 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 ENAHQ8N8S7 591 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 PPTC7Q8NI37 304 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 RNF41Q9H4P4 317 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 UBE2ZQ9H832 354 aaPredicted RBP8.2□□□□□ -1.1
TRAV27-201ENST00000390457 PXMP2Q9NR77 195 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 ZSWIM5Q9P217 1185 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 MYH6P13533 1939 aa8.2□□□□□ -1.1
TRAV27-201ENST00000390457 SIP14410 1827 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 USP34Q70CQ2 3546 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
TRAV27-201ENST00000390457 KDM4AO75164 1064 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 LGR5O75473 907 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 ZNF286BP0CG31 522 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
TRAV27-201ENST00000390457 SDSP20132 328 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 CHMP4BP1P59074 171 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 SP2Q02086 613 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 IKBKEQ14164 716 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 KIAA0753Q2KHM9 967 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 HSDL1Q3SXM5 330 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 LEXMQ3ZCV2 418 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 ASPRV1Q53RT3 343 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRAV27-201ENST00000390457 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 VSIG10LQ86VR7 867 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 FBXO11Q86XK2 927 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 C7orf31Q8N865 590 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 DBF4BQ8NFT6 615 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
TRAV27-201ENST00000390457 PDCD2LQ9BRP1 358 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 C16orf70Q9BSU1 422 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 OSBPL7Q9BZF2 842 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 MRPL11Q9Y3B7 192 aaKnown RBP8.19□□□□□ -1.1
TRAV27-201ENST00000390457 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
TRAV27-201ENST00000390457 B4E1Z4 1266 aa8.18□□□□□ -1.1
TRAV27-201ENST00000390457 ZNF213O14771 459 aa8.18□□□□□ -1.1
TRAV27-201ENST00000390457 TGFB3P10600 412 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms