RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 TMEM260Q9NX78 707 aa11.33□□□□□ -0.6
TRBV6-4-201ENST00000390360 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
TRBV6-4-201ENST00000390360 ELP1O95163 1332 aa11.33□□□□□ -0.6
TRBV6-4-201ENST00000390360 A6NJR5 290 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 PTGS1P23219 599 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 ARHGAP4P98171 946 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 ARHGAP1Q07960 439 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 MTMR1Q13613 665 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 TRIM29Q14134 588 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 NEDD9Q14511 834 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 SLC39A5Q6ZMH5 540 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 PPTC7Q8NI37 304 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 COPS5Q92905 334 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 PGBD1Q96JS3 809 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 AIFM3Q96NN9 605 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 MLXIPQ9HAP2 919 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
TRBV6-4-201ENST00000390360 A0A0U1RQG5 324 aaPredicted RBP11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 JAK2O60674 1132 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 GGPS1O95749 300 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 MYL3P08590 195 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 CYP3A4P08684 503 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 ITGB5P18084 799 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 UBA1P22314 1058 aaKnown RBP11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 DGKDQ16760 1214 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 RASGRP4Q8TDF6 673 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 SPATA33Q96N06 139 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 SEZ6LQ9BYH1 1024 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
TRBV6-4-201ENST00000390360 NOP56O00567 594 aaKnown RBP11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 MMP3P08254 477 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 RTP1P59025 263 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 SP2Q02086 613 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 SNX17Q15036 470 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 METTL7BQ6UX53 244 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 NIPA1Q7RTP0 329 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 C7orf61Q8IZ16 206 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 ATP11BQ9Y2G3 1177 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 KIF3AQ9Y496 699 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
TRBV6-4-201ENST00000390360 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 MEIS1O00470 390 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 DTNBO60941 627 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 PPFIA4O75335 1185 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 KRT2P35908 639 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 USP11P51784 963 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 SAFBQ15424 915 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 NPY5RQ15761 445 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 CYFIP1Q7L576 1253 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 TBCKQ8TEA7 893 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 C8orf76Q96K31 380 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 KCNH7Q9NS40 1196 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
TRBV6-4-201ENST00000390360 PDE4DIPQ5VU43 2346 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 M0R2N6 131 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 ARVCFO00192 962 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 SORBS3O60504 671 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 MMP1P03956 469 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 KCNA2P16389 499 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 CIITAP33076 1130 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 PRR16Q569H4 304 aa11.28□□□□□ -0.6
TRBV6-4-201ENST00000390360 ANKRD33Q7Z3H0 272 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms