RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 TMED2Q15363 201 aa9.4□□□□□ -0.91
PKP4-202ENST00000389759 LRRC23Q53EV4 343 aaPredicted RBP9.4□□□□□ -0.91
PKP4-202ENST00000389759 GDAP1Q8TB36 358 aa9.4□□□□□ -0.91
PKP4-202ENST00000389759 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.91
PKP4-202ENST00000389759 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.91
PKP4-202ENST00000389759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.912e-8■■□□□ 14.2
PKP4-202ENST00000389759 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.91
PKP4-202ENST00000389759 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 A0A1W2PQC6 194 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 PABPN1LA6NDY0 278 aaKnown RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 KIF28PB7ZC32 967 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 LRRN2O75325 713 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 NSFP46459 744 aaKnown RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 OTUD6AQ7L8S5 288 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 ZNF354CQ86Y25 554 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 AFAP1L2Q8N4X5 818 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 TUBB6Q9BUF5 446 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 YIPF3Q9GZM5 350 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 TAF1DQ9H5J8 278 aaPredicted RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 EMILIN3Q9NT22 766 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 SNX24Q9Y343 169 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 USP6P35125 1406 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 LRRC53A6NM62 1247 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 PSMC2P35998 433 aaKnown RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 IRAK1P51617 712 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 MYL7Q01449 175 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 CHRNDQ07001 517 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 STOX1Q6ZVD7 989 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 TBC1D10CQ8IV04 446 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 ZNF653Q96CK0 615 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 PITPNM3Q9BZ71 974 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 RABGAP1Q9Y3P9 1069 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 METP08581 1390 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 MAPK13O15264 365 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 ACSL3O95573 720 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 INHBAP08476 426 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 CA4P22748 312 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 DRP2Q13474 957 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 SNX1Q13596 522 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
PKP4-202ENST00000389759 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 SPDL1Q96EA4 605 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 CHMP6Q96FZ7 201 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 LRRC1Q9BTT6 524 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 FUT8Q9BYC5 575 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
PKP4-202ENST00000389759 MLH3Q9UHC1 1453 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 K7ENM7 598 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 PODXLO00592 558 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 PPFIA2O75334 1257 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 CDC27P30260 824 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 EXOSC10Q01780 885 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 LRRC47Q8N1G4 583 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 SH2D3CQ8N5H7 860 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 CHP1Q99653 195 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 IL25Q9H293 177 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 PIH1D3Q9NQM4 214 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 EXOC1LA0A1B0GW35 172 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 MAP3K7O43318 606 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 NCK2O43639 380 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 GCFC2P16383 781 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 FXR1P51114 621 aaKnown RBP eCLIP9.38□□□□□ -0.91
PKP4-202ENST00000389759 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 FMR1Q06787 632 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■■■■■ 30.9
PKP4-202ENST00000389759 HADHQ16836 314 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 AOC3Q16853 763 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 KAZNQ674X7 775 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 TBC1D22AQ8WUA7 517 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.38□□□□□ -0.915e-10■■■■■ 31.4
PKP4-202ENST00000389759 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 USP42Q9H9J4 1324 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 CFAP73A6NFT4 308 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 H0Y3Z8 333 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 CYB5R4Q7L1T6 521 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 NOA1Q8NC60 698 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 ENGASEQ8NFI3 743 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 RUBCNQ92622 972 aa9.38□□□□□ -0.91
PKP4-202ENST00000389759 DDX47Q9H0S4 455 aaKnown RBP9.38□□□□□ -0.91
PKP4-202ENST00000389759 EPN3Q9H201 632 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms