RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 IL1R1P14778 569 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 TMEM179Q6ZVK1 233 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 CACNA2D3Q8IZS8 1091 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 AGXT2Q9BYV1 514 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 SUGT1Q9Y2Z0 365 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 STK36Q9NRP7 1315 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 IRAK1P51617 712 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 MAEAQ7L5Y9 396 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 IFT20Q8IY31 132 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 BPIFA3Q9BQP9 254 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 MMRN2Q9H8L6 949 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 PCDHAC2Q9Y5I4 1007 aa20.74■□□□□ 0.91
PPFIA1-202ENST00000389547 FOXP2O15409 715 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 ONECUT3O60422 494 aaPredicted RBP20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 SLC7A5Q01650 507 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 NNTQ13423 1086 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 TMED8Q6PL24 325 aaPredicted RBP20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 HAUS4Q9H6D7 363 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 TMEM260Q9NX78 707 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 GRM4Q14833 912 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 COG1Q8WTW3 980 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 CCDC51Q96ER9 411 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 AHDC1Q5TGY3 1603 aaPredicted RBP20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 VIMP08670 466 aaKnown RBP20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 HHIPL2Q6UWX4 724 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 KLC4Q9NSK0 619 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 HDAC6Q9UBN7 1215 aa20.73■□□□□ 0.91
PPFIA1-202ENST00000389547 CDC37Q16543 378 aaPredicted RBP20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 CRY2Q49AN0 593 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 C16orf86Q6ZW13 317 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 TMOD4Q9NZQ9 345 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 CYP4A11Q02928 519 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 OR8K1Q8NGG5 319 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 PRPF4BQ13523 1007 aaKnown RBP20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 ZNF341Q9BYN7 854 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 SAMD15Q9P1V8 674 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 LRRIQ3A6PVS8 624 aaPredicted RBP20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 MYZAPP0CAP1 466 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 PCK1P35558 622 aa20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 DDX25Q9UHL0 483 aaKnown RBP20.72■□□□□ 0.91
PPFIA1-202ENST00000389547 SEC23AQ15436 765 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 HIBCHQ6NVY1 386 aaPredicted RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 SUGP1Q8IWZ8 645 aaKnown RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 SYCP3Q8IZU3 236 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 TMEM39BQ9GZU3 492 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 PAK2Q13177 524 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 TRIM14Q14142 442 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 RSRC2Q7L4I2 434 aaKnown RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 TBC1D8BQ0IIM8 1120 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 ZKSCAN8Q15776 578 aaPredicted RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 USP49Q70CQ1 688 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 SAMD7Q7Z3H4 446 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 SULF1Q8IWU6 871 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 KIRREL3Q8IZU9 778 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 CERS5Q8N5B7 392 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 HNRNPLLQ8WVV9 542 aaKnown RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 MAN1B1Q9UKM7 699 aa20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 SRPRBQ9Y5M8 271 aaKnown RBP20.71■□□□□ 0.91
PPFIA1-202ENST00000389547 TEX33O43247 280 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 SORBS3O60504 671 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 PTPREP23469 700 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 GALNT17Q6IS24 598 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 KLHL7Q8IXQ5 586 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 PANX2Q96RD6 677 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 DDX4Q9NQI0 724 aaKnown RBP20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 ARID5AQ03989 594 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 FAM83BQ5T0W9 1011 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 RSBN1LQ6PCB5 846 aaPredicted RBP20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 CCPG1Q9ULG6 757 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 STAT2P52630 851 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 RASA3Q14644 834 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 GLT8D2Q9H1C3 349 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 FAM184BQ9ULE4 1060 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 C5P01031 1676 aa20.7■□□□□ 0.9
PPFIA1-202ENST00000389547 FOXN1O15353 648 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 TFRCP02786 760 aaKnown RBP20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 ZRSR2Q15696 482 aaKnown RBP20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 NTRK3Q16288 839 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 SPATA1Q5VX52 437 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 DCAF15Q66K64 600 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 ADGRF4Q8IZF3 695 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 COL18A1P39060 1754 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 DDTLA6NHG4 134 aaPredicted RBP20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 PP2D1A8MPX8 630 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 HERC4Q5GLZ8 1057 aaPredicted RBP20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 SHC4Q6S5L8 630 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 SPDL1Q96EA4 605 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 MYO1AQ9UBC5 1043 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 STK38LQ9Y2H1 464 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 CXCR5P32302 372 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 RCAN1P53805 252 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 ZFPM1Q8IX07 1006 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 ENGASEQ8NFI3 743 aa20.69■□□□□ 0.9
PPFIA1-202ENST00000389547 LRRC27Q9C0I9 530 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms