RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZNF771Q7L3S4 317 aaPredicted RBP16.6■□□□□ 0.25
SCFD2-201ENST00000388940 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 CRYGNQ8WXF5 182 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 RPGRIP1Q96KN7 1286 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 ANO3Q9BYT9 981 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 PANK4Q9NVE7 773 aa16.6■□□□□ 0.25
SCFD2-201ENST00000388940 RCCD1A6NED2 376 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
SCFD2-201ENST00000388940 PLSCR1O15162 318 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
SCFD2-201ENST00000388940 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 CEP63Q96MT8 703 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 PCDHA2Q9Y5H9 948 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 ATAD5Q96QE3 1844 aa16.59■□□□□ 0.25
SCFD2-201ENST00000388940 SCN9AQ15858 1988 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L15C9J2P7 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L13C9JLJ4 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L11C9JVI0 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L18D6R9N7 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L22D6RA61 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L19D6RCP7 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L20D6RJB6 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 MEIS2O14770 477 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L24Q0WX57 530 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 KIF5AQ12840 1032 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 SPA17Q15506 151 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 WDR93Q6P2C0 686 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 CCDC65Q8IXS2 484 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 GBP3Q9H0R5 595 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 DBNDD1Q9H9R9 158 aa16.58■□□□□ 0.25
SCFD2-201ENST00000388940 TBX3O15119 743 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 TFRCP02786 760 aaKnown RBP16.58■□□□□ 0.24
SCFD2-201ENST00000388940 ATP1A1P05023 1023 aaKnown RBP16.58■□□□□ 0.24
SCFD2-201ENST00000388940 MMP10P09238 476 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 MMP14P50281 582 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.24
SCFD2-201ENST00000388940 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
SCFD2-201ENST00000388940 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 ARHGAP20Q9P2F6 1191 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 SERPINA10Q9UK55 444 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 KIAA1024Q9UPX6 916 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.24
SCFD2-201ENST00000388940 ZNF263O14978 683 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
SCFD2-201ENST00000388940 GNA14O95837 355 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 PLA2G4BP0C869 781 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 CKAP4Q07065 602 aaKnown RBP16.57■□□□□ 0.24
SCFD2-201ENST00000388940 LRRC41Q15345 812 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 HDXQ7Z353 690 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 KIAA0825Q8IV33 1275 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 BAP1Q92560 729 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 GJA10Q969M2 543 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 L1RE1Q9UN81 338 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 TFR2Q9UP52 801 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 FRMD3A2A2Y4 597 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 E9PMD0 336 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 EPHB6O15197 1021 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 TCP10Q12799 353 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 Q4G0T1 1027 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 ZC3H3Q8IXZ2 948 aaKnown RBP16.57■□□□□ 0.24
SCFD2-201ENST00000388940 AMNQ9BXJ7 453 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
SCFD2-201ENST00000388940 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
SCFD2-201ENST00000388940 ENC1O14682 589 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
SCFD2-201ENST00000388940 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 ICA1Q05084 483 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 C2CD5Q86YS7 1000 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 NOA1Q8NC60 698 aaKnown RBP16.56■□□□□ 0.24
SCFD2-201ENST00000388940 SECISBP2LQ93073 1101 aaKnown RBP16.56■□□□□ 0.24
SCFD2-201ENST00000388940 RHOXF2Q9BQY4 288 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 PCDHA13Q9Y5I0 950 aa16.56■□□□□ 0.24
SCFD2-201ENST00000388940 F5H6K3 240 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 CYP11B2P19099 503 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 CACNB3P54284 484 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ARHGAP4P98171 946 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 KLRC3Q07444 240 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms