RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
SNPH-202ENST00000381873 ACCSQ96QU6 501 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 CPDO75976 1380 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
SNPH-202ENST00000381873 GUCY2FP51841 1108 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
SNPH-202ENST00000381873 P2RX5Q93086 422 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 FAM149B1Q96BN6 582 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 MASTLQ96GX5 879 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 ITSN1Q15811 1721 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 MMP1P03956 469 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
SNPH-202ENST00000381873 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
SNPH-202ENST00000381873 C10orf67Q8IYJ2 551 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 CACNA2D3Q8IZS8 1091 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 NME8Q8N427 588 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 RIPOR2Q9Y4F9 1068 aa16.24■□□□□ 0.19
SNPH-202ENST00000381873 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
SNPH-202ENST00000381873 PPFIA4O75335 1185 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 MYL1P05976 194 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 ASNSP08243 561 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PPARDQ03181 441 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 LMNB1P20700 586 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 ITKQ08881 620 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 MIGA2Q7L4E1 593 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RILPQ96NA2 401 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RCOR1Q9UKL0 485 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PXDNLA1KZ92 1463 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 CUL4BQ13620 913 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RPS6KA2Q15349 733 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 MUM1L1Q5H9M0 696 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
SNPH-202ENST00000381873 ANKRD42Q8N9B4 389 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 ISCA1Q9BUE6 129 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 TMEM206Q9H813 350 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
SNPH-202ENST00000381873 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PFDN6O15212 129 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 INPP5BP32019 993 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 ANKRD36BP1Q96IX9 119 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 CCDC68Q9H2F9 335 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
SNPH-202ENST00000381873 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
SNPH-202ENST00000381873 PTPREP23469 700 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 LINC00301Q8NCQ3 95 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 A6NJR5 290 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 ABCD1P33897 745 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 CDK8P49336 464 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
SNPH-202ENST00000381873 SMAP1Q8IYB5 467 aaPredicted RBP16.22■□□□□ 0.19
SNPH-202ENST00000381873 DPH5Q9H2P9 285 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 PIH1D3Q9NQM4 214 aaKnown RBP16.22■□□□□ 0.19
SNPH-202ENST00000381873 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 LRRC41Q15345 812 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 BBOF1Q8ND07 529 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 FAM81BQ96LP2 452 aa16.22■□□□□ 0.19
SNPH-202ENST00000381873 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNPH-202ENST00000381873 EHHADHQ08426 723 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 MAN2A1Q16706 1144 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 LRRC8AQ8IWT6 810 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 TSC1Q92574 1164 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 VCX3BQ9H321 246 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 SYNJ2BP-COX16A0A087WUM0 186 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 AFPP02771 609 aaKnown RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 CASP14P31944 242 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 MESDQ14696 234 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 COX16Q9P0S2 106 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 H7C0C1 242 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 CCND2P30279 289 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 ATP5OP48047 213 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 CUL4AQ13619 759 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 Q3C1V9 767 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 EEPD1Q7L9B9 569 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 RPUSD2Q8IZ73 545 aaKnown RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 GTF2A1P52655 376 aaPredicted RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 PDXDC2PQ6P474 469 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
SNPH-202ENST00000381873 RSRC1Q96IZ7 334 aaKnown RBP16.21■□□□□ 0.19
SNPH-202ENST00000381873 RICTORQ6R327 1708 aa16.21■□□□□ 0.18
SNPH-202ENST00000381873 CDC25AP30304 524 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 TFAMQ00059 246 aaKnown RBP16.2■□□□□ 0.18
SNPH-202ENST00000381873 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 TRIM11Q96F44 468 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
SNPH-202ENST00000381873 ARHGAP25P42331 645 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
SNPH-202ENST00000381873 GPT2Q8TD30 523 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 MGARPQ8TDB4 240 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 IKBKBO14920 756 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms