RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 PNMA2Q9UL42 364 aa13.33□□□□□ -0.28
SHOX-203ENST00000381578 RFX7Q2KHR2 1363 aa13.33□□□□□ -0.28
SHOX-203ENST00000381578 DYNLL1P63167 89 aaKnown RBP13.33□□□□□ -0.28
SHOX-203ENST00000381578 DENND2CQ68D51 928 aa13.33□□□□□ -0.28
SHOX-203ENST00000381578 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.28
SHOX-203ENST00000381578 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
SHOX-203ENST00000381578 FSBPO95073 299 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 MXRA7P84157 204 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 TAF11Q15544 211 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
SHOX-203ENST00000381578 PBX1P40424 430 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 ACCSLQ4AC99 568 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 MTMR8Q96EF0 704 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 SRGNP10124 158 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 ARID4AP29374 1257 aaPredicted RBP13.32□□□□□ -0.28
SHOX-203ENST00000381578 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 TMEM266Q2M3C6 531 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 GDAP1Q8TB36 358 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
SHOX-203ENST00000381578 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
SHOX-203ENST00000381578 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 EVI5O60447 810 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 PDE8BO95263 885 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 TNNI2P48788 182 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 NBPF9Q3BBW0 867 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 RAPGEF5Q92565 580 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 CELF4Q9BZC1 486 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 GSG1L2A8MUP6 293 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 GNAT2P19087 354 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 COPB2P35606 906 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 HSD17B3P37058 310 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 VPS41P49754 854 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 RBBP5Q15291 538 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 QPCTQ16769 361 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 U2AF1L4Q8WU68 220 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 TAF1DQ9H5J8 278 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 A0A1W2PRG0 241 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 FOXP2O15409 715 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 CIAO1O76071 339 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 GSCP56915 257 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
SHOX-203ENST00000381578 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
SHOX-203ENST00000381578 A0A1W2PQC6 194 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 HIP1RO75146 1068 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 TRIM37O94972 964 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 CALM1P0DP23 149 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 CALM2P0DP24 149 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 CALM3P0DP25 149 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 SH3GL2Q99962 352 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 NOP53Q9NZM5 478 aaKnown RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 STK36Q9NRP7 1315 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 ANP32DO95626 131 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 KLRC1P26715 233 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 POLE2P56282 527 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 DHTKD1Q96HY7 919 aaPredicted RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 IRAK4Q9NWZ3 460 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 SNX24Q9Y343 169 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 ERFP50548 548 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 INTS8Q75QN2 995 aaKnown RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 LPIN2Q92539 896 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 PSMD1Q99460 953 aa13.3□□□□□ -0.28
SHOX-203ENST00000381578 BIN2Q9UBW5 565 aaPredicted RBP13.3□□□□□ -0.28
SHOX-203ENST00000381578 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 SART1O43290 800 aaKnown RBP13.29□□□□□ -0.28
SHOX-203ENST00000381578 GYG1P46976 350 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 HERC4Q5GLZ8 1057 aaPredicted RBP13.29□□□□□ -0.28
SHOX-203ENST00000381578 SNX29Q8TEQ0 813 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 DNM1LO00429 736 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 TTI1O43156 1089 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms