RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 C11orf57Q6ZUT1 292 aaPredicted RBP16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 STK24Q9Y6E0 443 aa16.33■□□□□ 0.2
SYNGR1-204ENST00000381535 FAM155AB1AL88 458 aaPredicted RBP16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 HERVK_113P62684 666 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 NOGQ13253 232 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 PARP14Q460N5 1801 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 RGMBQ6NW40 437 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 SPATA20Q8TB22 786 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 MTRQ99707 1265 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
SYNGR1-204ENST00000381535 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 CA12O43570 354 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 ARP10275 920 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 CETPP11597 493 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 CASP1P29466 404 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 GTF2A2P52657 109 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 CUL4BQ13620 913 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 MORC3Q14149 939 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 IQCB1Q15051 598 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 PGM5Q15124 567 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 PAGR1Q9BTK6 254 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 SPATC1LQ9H0A9 340 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 MAGEF1Q9HAY2 307 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 FBXO40Q9UH90 709 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 PTPRFP10586 1907 aa16.31■□□□□ 0.2
SYNGR1-204ENST00000381535 PEX10O60683 326 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 CNMDO75829 334 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 MYL1P05976 194 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 AMPD3Q01432 767 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 TMEM119Q4V9L6 283 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 XRRA1Q6P2D8 792 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 BPIFA3Q9BQP9 254 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 CYP39A1Q9NYL5 469 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SYNGR1-204ENST00000381535 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 KDM3AQ9Y4C1 1321 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 BECN2A8MW95 431 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 GOLGA6L19H0YKK7 550 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 PSMD10O75832 226 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 BCRP11274 1271 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 ITGB5P18084 799 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 ECM1Q16610 540 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 HYIQ5T013 277 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 SPRYD7Q5W111 196 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 VSIG10LQ86VR7 867 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 NCAPG2Q86XI2 1143 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 RAD54LQ92698 747 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 MS4A4AQ96JQ5 239 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 C7orf25Q9BPX7 421 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 BLOC1S4Q9NUP1 217 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
SYNGR1-204ENST00000381535 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
SYNGR1-204ENST00000381535 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms