RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 HACE1Q8IYU2 909 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CENPTQ96BT3 561 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SGSM3Q96HU1 749 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 AZI2Q9H6S1 392 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 UBA7P41226 1012 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KIF11P52732 1056 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 GNGT1P63211 74 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CCNA1P78396 465 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KIF23Q02241 960 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC144BQ3MJ40 725 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ELMSAN1Q6PJG2 1045 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KDM7AQ6ZMT4 941 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 RIN3Q8TB24 985 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 TMCO1Q9UM00 188 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 SPAG6O75602 509 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CEP85Q6P2H3 762 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 SETD3Q86TU7 594 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 MICU3Q86XE3 530 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 XPO6Q96QU8 1125 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 IFNKQ9P0W0 207 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CHPF2Q9P2E5 772 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 DENND2AQ9ULE3 1009 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CORO1CQ9ULV4 474 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 SLX4Q8IY92 1834 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 DHX34Q14147 1143 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CASP8Q14790 479 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 JARID2Q92833 1246 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 FRMD8P1Q9BZ68 369 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 EPS8L2Q9H6S3 715 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 SH3GLB2Q9NR46 395 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 AP4S1Q9Y587 144 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 FER1L4A9Z1Z3 1794 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 NR1I2O75469 434 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 STK17AQ9UEE5 414 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 INTUQ9ULD6 942 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 LAMB4A4D0S4 1761 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 E7EVH7 732 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 E9PMD0 336 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 MAPK13O15264 365 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ZBTB16Q05516 673 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KLC1Q07866 573 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 DNAL1Q4LDG9 190 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 HAUS3Q68CZ6 603 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 NFATC2IPQ8NCF5 419 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ZSWIM6Q9HCJ5 1215 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PGRMC1O00264 195 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PSMC4P43686 418 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 IGBP1P78318 339 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PURAQ00577 322 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 BNC1Q01954 994 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 TUBA3CQ13748 450 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 DALRD3Q5D0E6 543 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CFAP36Q96G28 342 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ATP6V1G3Q96LB4 118 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ROPN1BQ9BZX4 212 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ROPN1Q9HAT0 212 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 MAGEE1Q9HCI5 957 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PRDM4Q9UKN5 801 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KIF13BQ9NQT8 1826 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PDS5AQ29RF7 1337 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 PSMD14O00487 310 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 AGTP01019 485 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CTNNA1P35221 906 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 STAT6P42226 847 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 STX17P56962 302 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 ZNF569Q5MCW4 686 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 SHQ1Q6PI26 577 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 BTNL9Q6UXG8 535 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 CACTINQ8WUQ7 758 aaKnown RBP5.29□□□□□ -1.56
PTPRD-203ENST00000381196 KCNH3Q9ULD8 1083 aa5.29□□□□□ -1.56
PTPRD-203ENST00000381196 H3BNX3 289 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 GTPBP6O43824 516 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 CALUO43852 315 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KDM1AO60341 852 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ANXA1P04083 346 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PCYT1AP49585 367 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 POSTNQ15063 836 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 LIN9Q5TKA1 542 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NLRP9Q7RTR0 991 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC25Q86WR0 208 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PPP4R1Q8TF05 950 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PPP1R2P1Q96PQ5 205 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NR1H4Q96RI1 486 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NACA2Q9H009 215 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 FOXP1Q9H334 677 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 IFT122Q9HBG6 1241 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 TBC1D7Q9P0N9 293 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 JAG2Q9Y219 1238 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 GINS2Q9Y248 185 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ATF5Q9Y2D1 282 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SQORQ9Y6N5 450 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 MICAL3Q7RTP6 2002 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 A8MXQ7 604 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SH3BP5O60239 455 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ATP6V1E1P36543 226 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ATN1P54259 1190 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 IFIT1BQ5T764 474 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 LRRC8BQ6P9F7 803 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms