RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 JRKLQ9Y4A0 524 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 KIF13BQ9NQT8 1826 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 SLC26A4O43511 780 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 EIF4A3P38919 411 aaKnown RBP13.21□□□□□ -0.29
TRIM23-203ENST00000381018 SCNN1DP51172 638 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 KCTD1Q719H9 257 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 RRAGAQ7L523 313 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 GLIS3Q8NEA6 775 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 EHD4Q9H223 541 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
TRIM23-203ENST00000381018 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
TRIM23-203ENST00000381018 AKR1B10O60218 316 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 FKBP3Q00688 224 aaKnown RBP13.21□□□□□ -0.3
TRIM23-203ENST00000381018 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 PDXDC1Q6P996 788 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 BAP1Q92560 729 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 TEKT1Q969V4 418 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC17Q96LX7 622 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 VPS18Q9P253 973 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 SNX12Q9UMY4 172 aa13.21□□□□□ -0.3
TRIM23-203ENST00000381018 ATF5Q9Y2D1 282 aaPredicted RBP13.21□□□□□ -0.3
TRIM23-203ENST00000381018 TRAF5O00463 557 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 ZNF185O15231 689 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
TRIM23-203ENST00000381018 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM23-203ENST00000381018 GYS2P54840 703 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
TRIM23-203ENST00000381018 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 GJA10Q969M2 543 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 CEP63Q96MT8 703 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 VIPAS39Q9H9C1 493 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 MED4Q9NPJ6 270 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
TRIM23-203ENST00000381018 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 GNA14O95837 355 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 USP11P51784 963 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC70Q6NSX1 233 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 CEP72Q9P209 647 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 G3V3G9 751 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 PJA2O43164 708 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 N4BP1O75113 896 aaKnown RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 MOCS3O95396 460 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 PRLRP16471 622 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 ERCC3P19447 782 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 TNNT3P45378 269 aaPredicted RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 SMCR8Q8TEV9 937 aaPredicted RBP13.19□□□□□ -0.3
TRIM23-203ENST00000381018 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 MLXIPQ9HAP2 919 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
TRIM23-203ENST00000381018 E9PMD0 336 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 NPR1P16066 1061 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 MAGEA1P43355 309 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 LMAN1P49257 510 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 HNRNPH2P55795 449 aaKnown RBP13.18□□□□□ -0.3
TRIM23-203ENST00000381018 ITIH3Q06033 890 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 KCNMA1Q12791 1236 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 MOXD1Q6UVY6 613 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 ZNF572Q7Z3I7 529 aaPredicted RBP13.18□□□□□ -0.3
TRIM23-203ENST00000381018 GPBP1Q86WP2 473 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 SYN2Q92777 582 aaPredicted RBP13.18□□□□□ -0.3
TRIM23-203ENST00000381018 ANO3Q9BYT9 981 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 FAN1Q9Y2M0 1017 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 HYOU1Q9Y4L1 999 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
TRIM23-203ENST00000381018 AFF2P51816 1311 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 POTECB2RU33 542 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L15C9J2P7 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L13C9JLJ4 530 aa13.17□□□□□ -0.3
TRIM23-203ENST00000381018 USP17L11C9JVI0 530 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms