RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
DNMT3A-204ENST00000380756 RASGRP2Q7LDG7 609 aa13.9□□□□□ -0.18
DNMT3A-204ENST00000380756 GSPT2Q8IYD1 628 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-204ENST00000380756 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
DNMT3A-204ENST00000380756 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
DNMT3A-204ENST00000380756 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.191e-5■■■■□ 25.7
DNMT3A-204ENST00000380756 CYP2C19P33261 490 aa13.9□□□□□ -0.19
DNMT3A-204ENST00000380756 UBE2SQ16763 222 aa13.9□□□□□ -0.19
DNMT3A-204ENST00000380756 MIER3Q7Z3K6 550 aa13.9□□□□□ -0.19
DNMT3A-204ENST00000380756 PBKQ96KB5 322 aa13.9□□□□□ -0.19
DNMT3A-204ENST00000380756 EIF3CLB5ME19 914 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 K7ENM7 598 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 STAMBPO95630 424 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 GGCXP38435 758 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 DHX9Q08211 1270 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 HHATQ5VTY9 493 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 CCDC127Q96BQ5 260 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 EIF3CQ99613 913 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 DEPDC5O75140 1603 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 LRRC53A6NM62 1247 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 CLIC2O15247 247 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 GRIN1Q05586 938 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 STRN3Q13033 797 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 FYB2Q5VWT5 728 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 POTEMA6NI47 508 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 MEIS1O00470 390 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 MESDQ14696 234 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 PPFIBP2Q8ND30 876 aa13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-204ENST00000380756 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 IFNAR2P48551 515 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PDCLQ13371 301 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PTPAQ15257 358 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 ZNF512BQ96KM6 892 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 CAPN11Q9UMQ6 739 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 GFPT2O94808 682 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PLTPP55058 493 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 DPYDQ12882 1025 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 GLE1Q53GS7 698 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PHF20Q9BVI0 1012 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 MAGEA9P43362 315 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 TSNARE1Q96NA8 513 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 ORC4O43929 436 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 TNNI1P19237 187 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 GBP1P32455 592 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 PCK1P35558 622 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 KCNB1Q14721 858 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 LRCH2Q5VUJ6 765 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 KRT26Q7Z3Y9 468 aa13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-204ENST00000380756 LRRN2O75325 713 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 IFNB1P01574 187 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 ADCY8P40145 1251 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 SREK1Q8WXA9 508 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 STMN2Q93045 179 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 MAK16Q9BXY0 300 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 AGXT2Q9BYV1 514 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 PASKQ96RG2 1323 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 PALMO75781 387 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 MYL7Q01449 175 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 NFRKBQ6P4R8 1299 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 TXNDC16Q9P2K2 825 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 CLTAP09496 248 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 GAP43P17677 238 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 PROM2Q8N271 834 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 MRPL11Q9Y3B7 192 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-204ENST00000380756 ITIH6Q6UXX5 1313 aa13.86□□□□□ -0.19
DNMT3A-204ENST00000380756 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
DNMT3A-204ENST00000380756 GUF1Q8N442 669 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-204ENST00000380756 VPS37BQ9H9H4 285 aa13.86□□□□□ -0.19
DNMT3A-204ENST00000380756 SERPINA10Q9UK55 444 aa13.86□□□□□ -0.19
DNMT3A-204ENST00000380756 HPSEQ9Y251 543 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms