RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 OATP04181 439 aa17.43■□□□□ 0.38
COL2A1-202ENST00000380518 RFC1P35251 1148 aaPredicted RBP17.43■□□□□ 0.38
COL2A1-202ENST00000380518 SATB1Q01826 763 aa17.43■□□□□ 0.38
COL2A1-202ENST00000380518 ERFEQ4G0M1 354 aa17.43■□□□□ 0.38
COL2A1-202ENST00000380518 EAPPQ56P03 285 aaPredicted RBP17.43■□□□□ 0.38
COL2A1-202ENST00000380518 CDHR1Q96JP9 859 aa17.43■□□□□ 0.38
COL2A1-202ENST00000380518 FAN1Q9Y2M0 1017 aa17.43■□□□□ 0.38
COL2A1-202ENST00000380518 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 NDUFA10O95299 355 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 ABCD1P33897 745 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PDE1BQ01064 536 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 DBN1Q16643 649 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 SGO2Q562F6 1265 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL2A1-202ENST00000380518 COA7Q96BR5 231 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PAGE5Q96GU1 130 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
COL2A1-202ENST00000380518 SOWAHDA6NJG2 315 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 SGK1O00141 431 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 ECEL1O95672 775 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PLCG1P19174 1290 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 EIF4A3P38919 411 aaKnown RBP17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PLTPP55058 493 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 ITKQ08881 620 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 PTPN21Q16825 1174 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 CLIC2O15247 247 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 EVI5O60447 810 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 LPXNO60711 386 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 BAG2O95816 211 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 SERPINB2P05120 415 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 RFX6Q8HWS3 928 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 GCNT4Q9P109 453 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 USP14P54578 494 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 IGBP1P78318 339 aa17.42■□□□□ 0.38
COL2A1-202ENST00000380518 MRPL47Q9HD33 250 aaKnown RBP17.42■□□□□ 0.38
COL2A1-202ENST00000380518 TTC37Q6PGP7 1564 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 ZMYND10O75800 440 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 LRRC63Q05C16 580 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 SESTD1Q86VW0 696 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 ANKRD36BP1Q96IX9 119 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
COL2A1-202ENST00000380518 CLRN2A0PK11 232 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 SERPING1P05155 500 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 STAG1Q8WVM7 1258 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 CEP170P1Q96L14 293 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 NDST4Q9H3R1 872 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 Q9H521 79 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 ATP8A1Q9Y2Q0 1164 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 ABL1P00519 1130 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 INO80B-WBP1J3KQ70 363 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 SART1O43290 800 aaKnown RBP17.41■□□□□ 0.38
COL2A1-202ENST00000380518 GFPT2O94808 682 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
COL2A1-202ENST00000380518 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
COL2A1-202ENST00000380518 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
COL2A1-202ENST00000380518 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
COL2A1-202ENST00000380518 FTCDO95954 541 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 PLA2G4BP0C869 781 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 TTC19Q6DKK2 380 aaPredicted RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 DGKHQ86XP1 1220 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 CACYBPQ9HB71 228 aaKnown RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 GPC4O75487 556 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 MXI1P50539 228 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 ASPHQ12797 758 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 KMT5BQ4FZB7 885 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 IPO11Q9UI26 975 aaKnown RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 NUB1Q9Y5A7 615 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 SAT1P21673 171 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 TRIM42Q8IWZ5 723 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 MEIS1O00470 390 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 GDF11O95390 407 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 STAT2P52630 851 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 PRPSAP1Q14558 356 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 EXOC8Q8IYI6 725 aa17.4■□□□□ 0.38
COL2A1-202ENST00000380518 FAM193BQ96PV7 902 aaPredicted RBP17.4■□□□□ 0.38
COL2A1-202ENST00000380518 MOCS3O95396 460 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SH3BGRP55822 239 aaPredicted RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 DHX9Q08211 1270 aaKnown RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 IFT88Q13099 833 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 PRPF31Q8WWY3 499 aaKnown RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 PARD6BQ9BYG5 372 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms