RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MAP7Q14244 749 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF530Q6P9A1 599 aaPredicted RBP10.23□□□□□ -0.77
PTPRA-204ENST00000380393 MIGA2Q7L4E1 593 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 CACNA2D4Q7Z3S7 1137 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 DNAJC9Q8WXX5 260 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 RAPGEF5Q92565 580 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
PTPRA-204ENST00000380393 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 SLC39A3Q9BRY0 314 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 AGAP1Q9UPQ3 857 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 HEY1Q9Y5J3 304 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 BAG3O95817 575 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 ETS2P15036 469 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 KCNA3P22001 575 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 MSH2P43246 934 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 PMS2P54278 862 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 CACNA2D1P54289 1103 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 SYNCQ9H7C4 482 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 PLAAQ9Y263 795 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 SLIT3O75094 1523 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 KRT16P08779 473 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 HSPA1LP34931 641 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 PEX5P50542 639 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 LSAMPQ13449 338 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 MUM1Q2TAK8 710 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 SLC7A5P1Q8MH63 180 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 ANKK1Q8NFD2 765 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 CATSPER2Q96P56 530 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 LRRC1Q9BTT6 524 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 PCDHA7Q9UN72 937 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF148Q9UQR1 794 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 KCNA2P16389 499 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 MATR3P43243 847 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■■■■□ 23.1
PTPRA-204ENST00000380393 SH3BGRP55822 239 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 IQCKQ8N0W5 287 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 RNF10Q8N5U6 811 aaKnown RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 GPATCH3Q96I76 525 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 CEP295NLQ96MC4 621 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 EIF2AQ9BY44 585 aaKnown RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 DRC3Q9H069 523 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 IRF2BPLQ9H1B7 796 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 KCNQ3O43525 872 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 ACADSP16219 412 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 TUFMP49411 452 aaKnown RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 TAF7Q15545 349 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-204ENST00000380393 AZIN2Q96A70 460 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 SPATA17Q96L03 361 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 TM6SF1Q9BZW5 370 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 ECT2Q9H8V3 914 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 HESX1Q9UBX0 185 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 TSC22D4Q9Y3Q8 395 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
PTPRA-204ENST00000380393 GSTT2P0CG29 244 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 GSTT2BP0CG30 244 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 DRD4P21917 467 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 NCALDP61601 193 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 PTK7Q13308 1070 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 TRPM8Q7Z2W7 1104 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF713Q8N859 430 aaPredicted RBP10.21□□□□□ -0.77
PTPRA-204ENST00000380393 CAVIN3Q969G5 261 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 C8orf37Q96NL8 207 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 RASAL2Q9UJF2 1139 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 CARD8Q9Y2G2 431 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 COMMD3-BMI1R4GMX3 469 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 PDE2AO00408 941 aaPredicted RBP10.21□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF185O15231 689 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 ASLP04424 464 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 VAV2P52735 878 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 ADARP55265 1226 aaKnown RBP10.21□□□□□ -0.77
PTPRA-204ENST00000380393 GEMIN4P57678 1058 aaKnown RBP10.21□□□□□ -0.77
PTPRA-204ENST00000380393 RBL2Q08999 1139 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 RCN2Q14257 317 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 ANKRD1Q15327 319 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 RAB11FIP4Q86YS3 637 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 RAPGEF4Q8WZA2 1011 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 TIPINQ9BVW5 301 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 STIM2Q9P246 746 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.77
PTPRA-204ENST00000380393 TRIM10Q9UDY6 481 aa10.21□□□□□ -0.77
PTPRA-204ENST00000380393 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 SPTLC1O15269 473 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 FGFR1OPO95684 399 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 POLR3DP05423 398 aaPredicted RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 HSPA8P11142 646 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 ENDOUP21128 410 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 IGBP1P78318 339 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 CAMK2BQ13554 666 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 SEPT7Q16181 437 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 CMPK2Q5EBM0 449 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 LRRC43Q8N309 656 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 SLC17A8Q8NDX2 589 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 EDC3Q96F86 508 aaKnown RBP10.21□□□□□ -0.78
PTPRA-204ENST00000380393 SPATA16Q9BXB7 569 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 DDX21Q9NR30 783 aaKnown RBP eCLIP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms