RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 MYO1FO00160 1098 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 MAN1A1P33908 653 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PABPC4Q13310 644 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 GLE1Q53GS7 698 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LRRC43Q8N309 656 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 P3H4Q92791 437 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PITPNM3Q9BZ71 974 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 UBN2Q6ZU65 1347 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 MYL1P05976 194 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PPP4R1Q8TF05 950 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 DNAJC17Q9NVM6 304 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 AFPP02771 609 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 INHBAP08476 426 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 MYCLP12524 364 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ATF2P15336 505 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LMNB1P20700 586 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PSMC2P35998 433 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PLA2G4AP47712 749 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 CHRNDQ07001 517 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TRPC3Q13507 836 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TMED2Q15363 201 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ARMC2Q8NEN0 867 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 POMGNT1Q8WZA1 660 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 THAP9Q9H5L6 903 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 AGPAT5Q9NUQ2 364 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SUFUQ9UMX1 484 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RASA4BC9J798 803 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 CASQ2O14958 399 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RASA4O43374 803 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ECM2O94769 699 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TRAPPC10P48553 1259 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 NBPF9Q3BBW0 867 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RBM26Q5T8P6 1007 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ZNF579Q8NAF0 562 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LRRC53A6NM62 1247 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 KIF28PB7ZC32 967 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 H2AFZP0C0S5 128 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FMR1Q06787 632 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 H2AFVQ71UI9 128 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RNF168Q8IYW5 571 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SUPT20HQ8NEM7 779 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PPWD1Q96BP3 646 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 CXorf56Q9H5V9 222 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FHOD1Q9Y613 1164 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TOM1O60784 492 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PLEKHA8P1O95397 391 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 MSH2P43246 934 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ADCY2Q08462 1091 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RFX8Q6ZV50 586 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 CNOT10Q9H9A5 744 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 KIF1CO43896 1103 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 GAS7O60861 476 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 DDAH1O94760 285 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FGGP02679 453 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 KRT19P08727 400 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LSP1P33241 339 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FXR1P51114 621 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TMED1Q13445 227 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PHLDB3Q6NSJ2 640 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PARP9Q8IXQ6 854 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PROCA1Q8NCQ7 364 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LARSQ9P2J5 1176 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 THRAP3Q9Y2W1 955 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RABGAP1Q9Y3P9 1069 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SOS2Q07890 1332 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 IGSF1Q8N6C5 1336 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 CYP2D7A0A087X1C5 515 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 GYG2O15488 501 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 GFPT2O94808 682 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PTPREP23469 700 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LRRC14Q15048 493 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LRRC23Q53EV4 343 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 BSPRYQ5W0U4 402 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 GALNT17Q6IS24 598 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SCYL2Q6P3W7 929 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 NYAP1Q6ZVC0 841 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RAPH1Q70E73 1250 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ZC3H18Q86VM9 953 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PIP4K2CQ8TBX8 421 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 LY9Q9HBG7 655 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 RIC8AQ9NPQ8 531 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 AMACRQ9UHK6 382 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 PPP1R9AQ9ULJ8 1098 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SNAP23O00161 211 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 SAT1P21673 171 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ANKRD35Q8N283 1001 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 NEK9Q8TD19 979 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FBXO41Q8TF61 875 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 FAM167BQ9BTA0 163 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 MEIS1O00470 390 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ESRRAP11474 423 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 ALKBH5Q6P6C2 394 aaKnown RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TMTC3Q6ZXV5 915 aa4.55□□□□□ -1.68
BRCA2-201ENST00000380152 EPM2AIP1Q7L775 607 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-201ENST00000380152 TC2NQ8N9U0 490 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms