RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 SP2Q02086 613 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 MTMR1Q13613 665 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 UBE2Q1Q7Z7E8 422 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 KLHDC9Q8NEP7 349 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 CRYGNQ8WXF5 182 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 PDE4DIPQ5VU43 2346 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 ALPK3Q96L96 1907 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 CTAGE5O15320 804 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 SORBS3O60504 671 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 TGFB3P10600 412 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 UBA1P22314 1058 aaKnown RBP20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 GJB2P29033 226 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 ICAM3P32942 547 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 SEMA3FQ13275 785 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 FSCN1Q16658 493 aaKnown RBP20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 MXRA8Q9BRK3 442 aa20.53■□□□□ 0.88
TM6SF1-203ENST00000379384 SPATA31C2B4DYI2 1134 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 GH1P01241 217 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 RGS19P49795 217 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 NR5A1Q13285 461 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 CUL4AQ13619 759 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 KCNA10Q16322 511 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 CEP55Q53EZ4 464 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 GPRASP2Q96D09 838 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 JADE2Q9NQC1 790 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
TM6SF1-203ENST00000379384 CCDC194A0A1B0GVG4 234 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 FAM86B1E9PN63 330 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 CYP3A4P08684 503 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 FAM86B2P0C5J1 330 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 CST5P28325 142 aaPredicted RBP20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 ARHGAP1Q07960 439 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 KRT25Q7Z3Z0 450 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 DHX37Q8IY37 1157 aaKnown RBP20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 DIS3L2Q8IYB7 885 aaKnown RBP20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 FERMT2Q96AC1 680 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 SENP6Q9GZR1 1112 aaPredicted RBP20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 C11orf49Q9H6J7 331 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 KIF3AQ9Y496 699 aa20.51■□□□□ 0.87
TM6SF1-203ENST00000379384 BTBD18B2RXH4 712 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 GGPS1O95749 300 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 NKX3-2P78367 333 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 NONOQ15233 471 aaKnown RBP eCLIP20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 CCSAPQ6IQ19 270 aaPredicted RBP20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 PIK3AP1Q6ZUJ8 805 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 PCSK9Q8NBP7 692 aaKnown RBP20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 FBXO18Q8NFZ0 1043 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 CDHR1Q96JP9 859 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 KCNH7Q9NS40 1196 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 PKD2L1Q9P0L9 805 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 ASGR1P07306 291 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 COL6A1P12109 1028 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 CPT1AP50416 773 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 ACLYP53396 1101 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 SAFBQ15424 915 aaKnown RBP eCLIP20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 INF2Q27J81 1249 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 TSEN34Q9BSV6 310 aaKnown RBP20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 BCAS3Q9H6U6 928 aa20.5■□□□□ 0.87
TM6SF1-203ENST00000379384 ATP9AO75110 1047 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 EARS2Q5JPH6 523 aaKnown RBP20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 MLXIPQ9HAP2 919 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 PHF24Q9UPV7 400 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 CEP290O15078 2479 aa20.49■□□□□ 0.87
TM6SF1-203ENST00000379384 MOXD2PA6NHM9 499 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 MEIS1O00470 390 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 MAFGO15525 162 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 EDIL3O43854 480 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 ARP10275 920 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 USP11P51784 963 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 LAMC2Q13753 1193 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 NEDD9Q14511 834 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 BRDTQ58F21 947 aaPredicted RBP20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 CYFIP1Q7L576 1253 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 TNFRSF25Q93038 417 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 EMID1Q96A84 441 aaPredicted RBP20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 IPO9Q96P70 1041 aaKnown RBP20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 SENP7Q9BQF6 1050 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 IGLV3-22A0A075B6J6 115 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 A0A1W2PQ45 241 aaPredicted RBP20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 A0A1W2PQY0 241 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 FAM205CA6NFA0 338 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 A6NJR5 290 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 ZEB2O60315 1214 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 KCNA2P16389 499 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 HSDL1Q3SXM5 330 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 PRR16Q569H4 304 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 CXCL17Q6UXB2 119 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 PLA2G4DQ86XP0 818 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
TM6SF1-203ENST00000379384 MMP3P08254 477 aa20.47■□□□□ 0.87
TM6SF1-203ENST00000379384 CIITAP33076 1130 aa20.47■□□□□ 0.87
TM6SF1-203ENST00000379384 ATN1P54259 1190 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms