RNA–Protein interactions for RNA: ENST00000378792.1

CCL21-202, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CCL21, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-202ENST00000378792 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
CCL21-202ENST00000378792 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
CCL21-202ENST00000378792 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 ESYT2A0FGR8 921 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 SPATA31C2B4DYI2 1134 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 STXBP3O00186 592 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 NOP56O00567 594 aaKnown RBP12.39□□□□□ -0.43
CCL21-202ENST00000378792 CDKL5O76039 1030 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 RGS20O76081 388 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 GGPS1O95749 300 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 TIMP1P01033 207 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 CD4P01730 458 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 FPGSQ05932 587 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 TOB2Q14106 344 aaPredicted RBP12.39□□□□□ -0.43
CCL21-202ENST00000378792 MYSM1Q5VVJ2 828 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
CCL21-202ENST00000378792 TMEM199Q8N511 208 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 BADQ92934 168 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
CCL21-202ENST00000378792 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
CCL21-202ENST00000378792 TBX21Q9UL17 535 aa12.39□□□□□ -0.43
CCL21-202ENST00000378792 UBA1P22314 1058 aaKnown RBP12.38□□□□□ -0.43
CCL21-202ENST00000378792 PSMC6P62333 389 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
CCL21-202ENST00000378792 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
CCL21-202ENST00000378792 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
CCL21-202ENST00000378792 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCL21-202ENST00000378792 LRIT3Q3SXY7 679 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 METTL7BQ6UX53 244 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 ZMYND12Q9H0C1 365 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 NOD1Q9Y239 953 aa12.38□□□□□ -0.43
CCL21-202ENST00000378792 DEXIO95424 95 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 PTGS1P23219 599 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCL21-202ENST00000378792 UBE2SQ16763 222 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 NBPF20Q3BBV1 942 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 C22orf23Q9BZE7 217 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
CCL21-202ENST00000378792 HIPK3Q9H422 1215 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
CCL21-202ENST00000378792 B4GALT4O60513 344 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 HOXD8P13378 290 aaPredicted RBP12.36□□□□□ -0.43
CCL21-202ENST00000378792 XBP1P17861 261 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 ZNF76P36508 570 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 MTMR1Q13613 665 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 NTRK3Q16288 839 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 GPR153Q6NV75 609 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
CCL21-202ENST00000378792 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
CCL21-202ENST00000378792 PHKBQ93100 1093 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 MTIF3Q9H2K0 278 aaKnown RBP12.36□□□□□ -0.43
CCL21-202ENST00000378792 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
CCL21-202ENST00000378792 UBIAD1Q9Y5Z9 338 aa12.36□□□□□ -0.43
CCL21-202ENST00000378792 F2P00734 622 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 SREBF1P36956 1147 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
CCL21-202ENST00000378792 PSEN2P49810 448 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 NLRP5P59047 1200 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 SP2Q02086 613 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 BFSP2Q13515 415 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 MFSD10Q14728 455 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 PKN1Q16512 942 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 PSRC1Q6PGN9 363 aaPredicted RBP12.35□□□□□ -0.43
CCL21-202ENST00000378792 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 RETREG2Q8NC44 543 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 WASF1Q92558 559 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
CCL21-202ENST00000378792 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
CCL21-202ENST00000378792 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 TRPV6Q9H1D0 765 aa12.35□□□□□ -0.43
CCL21-202ENST00000378792 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
CCL21-202ENST00000378792 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CCL21-202ENST00000378792 H3BRB1 525 aa12.34□□□□□ -0.43
CCL21-202ENST00000378792 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CCL21-202ENST00000378792 PFKFB2O60825 505 aa12.34□□□□□ -0.43
CCL21-202ENST00000378792 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
CCL21-202ENST00000378792 PFKMP08237 780 aa12.34□□□□□ -0.43
CCL21-202ENST00000378792 GNAT1P11488 350 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms