RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 HDLBPQ00341 1268 aaKnown RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 PDE4DQ08499 809 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC82Q8N4S0 544 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 ANKS4BQ8N8V4 417 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 RASSF8Q8NHQ8 419 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 LMBR1Q8WVP7 490 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 CASKIN2Q8WXE0 1202 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 RSRC1Q96IZ7 334 aaKnown RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 ZKSCAN3Q9BRR0 538 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 MLXIPQ9HAP2 919 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 DDX20Q9UHI6 824 aaKnown RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 GOLGA6L10A0A0M3HER8 536 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 H0YGN5 161 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 LIN7AO14910 233 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 KRT14P02533 472 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 SLC7A5Q01650 507 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 TLDC1Q6P9B6 456 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 UNC13DQ70J99 1090 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 KRT25Q7Z3Z0 450 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 MAATS1Q7Z4T9 603 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 APLFQ8IW19 511 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 SEC14L1Q92503 715 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 N4BP2L2Q92802 583 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 SEC16BQ96JE7 1060 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 INCENPQ9NQS7 918 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 NFS1Q9Y697 457 aa9.03□□□□□ -0.96
PTPRR-203ENST00000378778 COL1A1P02452 1464 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-203ENST00000378778 WNT7AO00755 349 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.96
PTPRR-203ENST00000378778 ZC3H6P61129 1189 aaKnown RBP9.02□□□□□ -0.96
PTPRR-203ENST00000378778 SBK1Q52WX2 424 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 SFMBT2Q5VUG0 894 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 CABP7Q86V35 215 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 HOOK3Q86VS8 718 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 SRBD1Q8N5C6 995 aaKnown RBP9.02□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC26Q8TAB7 109 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 CALML4Q96GE6 196 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC134Q9H6E4 229 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 INTUQ9ULD6 942 aa9.02□□□□□ -0.96
PTPRR-203ENST00000378778 FLT1P17948 1338 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 CACNA1SQ13698 1873 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 PRKAB2O43741 272 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 PRDM1O75626 825 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 SCTRP47872 440 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 NPEPPSP55786 919 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 ICA1Q05084 483 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 SLC18A3Q16572 532 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 DGKHQ86XP1 1220 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 SH2D3CQ8N5H7 860 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 CCT6BQ92526 530 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 FAM129AQ9BZQ8 928 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 STMN4Q9H169 189 aaPredicted RBP9.02□□□□□ -0.97
PTPRR-203ENST00000378778 LRP2BPQ9P2M1 347 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 TTC7AQ9ULT0 858 aaPredicted RBP9.02□□□□□ -0.97
PTPRR-203ENST00000378778 ATP6V0A2Q9Y487 856 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF804BA4D1E1 1349 aa9.02□□□□□ -0.97
PTPRR-203ENST00000378778 A0A0A6YYK5 440 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 LRRC53A6NM62 1247 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 SART1O43290 800 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 GFPT2O94808 682 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 OR52Z1P0C646 297 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CYP7A1P22680 504 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 HSD17B3P37058 310 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 MATR3P43243 847 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 ASIC1P78348 528 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 SKIDA1Q1XH10 827 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 HGSNATQ68CP4 663 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 RRAGAQ7L523 313 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 MTMR8Q96EF0 704 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 RBM33Q96EV2 1170 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 NSRP1Q9H0G5 558 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CD248Q9HCU0 757 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 AIPL1Q9NZN9 384 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 MAPK8IP1Q9UQF2 711 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC88AQ3V6T2 1871 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 USP11P51784 963 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 SYCE1Q8N0S2 351 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 STAG2Q8N3U4 1231 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 GBP7Q8N8V2 638 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC197Q8NCU1 140 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 IFT81Q8WYA0 676 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 TLCD1Q96CP7 247 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 KRT12Q99456 494 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms