RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CCT6AP40227 531 aaKnown RBP21.71■■□□□ 1.07
SSU72-204ENST00000378726 FBXO38Q6PIJ6 1188 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 RAD54LQ92698 747 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 CCDC47Q96A33 483 aaKnown RBP21.71■■□□□ 1.07
SSU72-204ENST00000378726 CTNND2Q9UQB3 1225 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 MSH4O15457 936 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 STAT3P40763 770 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 ASIC1P78348 528 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 DLK2Q6UY11 383 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 SYT10Q6XYQ8 523 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 KCNK18Q7Z418 384 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 RWDD2AQ9UIY3 292 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 CTDP1Q9Y5B0 961 aaPredicted RBP21.7■■□□□ 1.06
SSU72-204ENST00000378726 COBLO75128 1261 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 USP2O75604 605 aaPredicted RBP21.7■■□□□ 1.06
SSU72-204ENST00000378726 UBXN2AP68543 259 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 DCPSQ96C86 337 aaKnown RBP21.7■■□□□ 1.06
SSU72-204ENST00000378726 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 EHMT1Q9H9B1 1298 aa21.7■■□□□ 1.06
SSU72-204ENST00000378726 ZBED4O75132 1171 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 ALAS1P13196 640 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 HMGCS2P54868 508 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 PAK1Q13153 545 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 HYIQ5T013 277 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 ADSSL1Q8N142 457 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 GIMAP8Q8ND71 665 aaPredicted RBP21.69■■□□□ 1.06
SSU72-204ENST00000378726 CLEC4DQ8WXI8 215 aa21.69■■□□□ 1.06
SSU72-204ENST00000378726 IGLV3-22A0A075B6J6 115 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 MYMKA6NI61 221 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 C19orf81C9J6K1 198 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 PDE4DQ08499 809 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 SPIRE1Q08AE8 756 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 LRRN4CLQ8ND94 238 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 NELFBQ8WX92 580 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 KIAA1024Q9UPX6 916 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 KDM3AQ9Y4C1 1321 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 NFIBO00712 420 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 HSD17B4P51659 736 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 MCF2L2Q86YR7 1114 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 L2HGDHQ9H9P8 463 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 EXOC1Q9NV70 894 aa21.68■■□□□ 1.06
SSU72-204ENST00000378726 SSC5DA1L4H1 1573 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 NOL9Q5SY16 702 aaKnown RBP21.67■■□□□ 1.06
SSU72-204ENST00000378726 DYMQ7RTS9 669 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 SULF1Q8IWU6 871 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.67■■□□□ 1.064e-17■■■□□ 14.7
SSU72-204ENST00000378726 LRRC27Q9C0I9 530 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
SSU72-204ENST00000378726 FDX1P10109 184 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 NCAPH2Q6IBW4 605 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 DPY19L2Q6NUT2 758 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 HOMER2Q9NSB8 354 aa21.67■■□□□ 1.06
SSU72-204ENST00000378726 DOCK1Q14185 1865 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 VWA5AO00534 786 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 SLC26A4O43511 780 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 KCNJ6P48051 423 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 STIM1Q13586 685 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 ATG4CQ96DT6 458 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
SSU72-204ENST00000378726 POTEB3A0JP26 581 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 POTECB2RU33 542 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 MED24O75448 989 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 STK4Q13043 487 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 CEP55Q53EZ4 464 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 MUM1L1Q5H9M0 696 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 CDKAL1Q5VV42 579 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 POTEBQ6S5H4 581 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 ERMNQ8TAM6 284 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 ZFP91Q96JP5 570 aaPredicted RBP21.65■■□□□ 1.06
SSU72-204ENST00000378726 FAM53CQ9NYF3 392 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 AFG3L2Q9Y4W6 797 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 PVALEFA0A1B0GWK0 134 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 ADM5C9JUS6 153 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 E9PMD0 336 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 MAP3K9P80192 1104 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 GABPB1Q06547 395 aaPredicted RBP21.65■■□□□ 1.06
SSU72-204ENST00000378726 HAUS3Q68CZ6 603 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 CATSPER3Q86XQ3 398 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 DDX12PQ92771 950 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 WNK4Q96J92 1243 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 COL20A1Q9P218 1284 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 PNMA2Q9UL42 364 aa21.65■■□□□ 1.06
SSU72-204ENST00000378726 FCER1AP12319 257 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 ERCC6LQ2NKX8 1250 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.64■■□□□ 1.06
SSU72-204ENST00000378726 UNC13DQ70J99 1090 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 KRT222Q8N1A0 295 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 INTS13Q9NVM9 706 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 TMOD4Q9NZQ9 345 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 VAV3Q9UKW4 847 aa21.64■■□□□ 1.06
SSU72-204ENST00000378726 PSMA7O14818 248 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 PTPN21Q16825 1174 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 CNNM4Q6P4Q7 775 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 VSTM4Q8IW00 320 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 ZNF446Q9NWS9 450 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 STK24Q9Y6E0 443 aa21.64■■□□□ 1.05
SSU72-204ENST00000378726 MEIS1O00470 390 aa21.63■■□□□ 1.05
SSU72-204ENST00000378726 PPP1R12BO60237 982 aaPredicted RBP21.63■■□□□ 1.05
SSU72-204ENST00000378726 SSBP05455 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms