RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 SFI1A8K8P3 1242 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 POTECB2RU33 542 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 SAMD7Q7Z3H4 446 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 IQCDQ96DY2 449 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 ZDHHC15Q96MV8 337 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 NOX5Q96PH1 765 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 VPS18Q9P253 973 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 LIG4P49917 911 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 LDHDQ86WU2 507 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 KIFAP3Q92845 792 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 FAM20AQ96MK3 541 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 MAP3K14Q99558 947 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 FAM107BQ9H098 131 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 RNF146Q9NTX7 359 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 SEPT9Q9UHD8 586 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 AK9Q5TCS8 1911 aa15.61■□□□□ 0.09
SHROOM1-203ENST00000378679 LTN1O94822 1766 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 STXBP3O00186 592 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 RBL2Q08999 1139 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 VSTM4Q8IW00 320 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 ZNF526Q8TF50 670 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 DLATP10515 647 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 GAP43P17677 238 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 GRIN1Q05586 938 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 SEPT7Q16181 437 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 SNRNP48Q6IEG0 339 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 JMJD4Q9H9V9 463 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 PARVGQ9HBI0 331 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 PRCPP42785 496 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 GMPSP49915 693 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 KRT31Q15323 416 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 MAN2A1Q16706 1144 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 EXOC3L4Q17RC7 722 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 CDAN1Q8IWY9 1227 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 NRBP2Q9NSY0 501 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 BCCIPQ9P287 314 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 ADAMTSL3P82987 1691 aa15.6■□□□□ 0.09
SHROOM1-203ENST00000378679 TRIM49BA6NDI0 452 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 HNRNPDLO14979 420 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 NEBLO76041 1014 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 GRIK5Q16478 980 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 SARM1Q6SZW1 724 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 UNC13DQ70J99 1090 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 DPP9Q86TI2 863 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 ANKRD13CQ8N6S4 541 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 SLC7A3Q8WY07 619 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 HOXC10Q9NYD6 342 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 PDS5AQ29RF7 1337 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 FAM205AQ6ZU69 1335 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 STAT3P40763 770 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 HMGCS2P54868 508 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 CCNA1P78396 465 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 PRPF6O94906 941 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 USP11P51784 963 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 PSMD2Q13200 908 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 DNAJC21Q5F1R6 531 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 POMGNT1Q8WZA1 660 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 SALL1Q9NSC2 1324 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 CCND2P30279 289 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 ZMYND12Q9H0C1 365 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 TMEM60Q9H2L4 133 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 MYOZ2Q9NPC6 264 aa15.59■□□□□ 0.09
SHROOM1-203ENST00000378679 DLG5Q8TDM6 1919 aa15.58■□□□□ 0.09
SHROOM1-203ENST00000378679 SPOPO43791 374 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 ORC2Q13416 577 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 MTMR1Q13613 665 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 PDLIM2Q96JY6 352 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 TRIM6Q9C030 488 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 NOD1Q9Y239 953 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 DDTLA6NHG4 134 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 TM4SF1P30408 202 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 IGBP1P78318 339 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 ANGEL2Q5VTE6 544 aaKnown RBP15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 MAATS1Q7Z4T9 603 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM186BQ8IYM0 893 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 FBXL16Q8N461 479 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 DEFB129Q9H1M3 183 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 VCPKMTQ9H867 229 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 CTTNBP2NLQ9P2B4 639 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 KRT19P08727 400 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 OSBPP22059 807 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 TUBB4BP68371 445 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 PLCB3Q01970 1234 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 PPM1KQ8N3J5 372 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 CCSER1Q9C0I3 900 aa15.58■□□□□ 0.08
SHROOM1-203ENST00000378679 SLC5A4Q9NY91 659 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms