RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ATP9AO75110 1047 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 PRR16Q569H4 304 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 KCNH7Q9NS40 1196 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 EDIL3O43854 480 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 TDP2O95551 362 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 ARP10275 920 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 MCTP2Q6DN12 878 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 CRYGNQ8WXF5 182 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 GJA10Q969M2 543 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 FERMT2Q96AC1 680 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 MXRA8Q9BRK3 442 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 RBM47A0AV96 593 aaKnown RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 FIBPO43427 364 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 GGPS1O95749 300 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 XRRA1Q6P2D8 792 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 CYFIP1Q7L576 1253 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 FAM177A1Q8N128 213 aaPredicted RBP13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 OR6J1Q8NGC5 347 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 OGDHLQ9ULD0 1010 aa13.34□□□□□ -0.27
DEPDC4-202ENST00000378244 SPATA31C2B4DYI2 1134 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 STAM2O75886 525 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 LRRC41Q15345 812 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 PAWRQ96IZ0 340 aaKnown RBP13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 SYT1P21579 422 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 RNF180Q86T96 592 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
DEPDC4-202ENST00000378244 IGLV3-22A0A075B6J6 115 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 MEIS1O00470 390 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 GH1P01241 217 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 CYP3A4P08684 503 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 TGFB3P10600 412 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 USP11P51784 963 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 KCNA10Q16322 511 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 GPRASP2Q96D09 838 aa13.32□□□□□ -0.28
DEPDC4-202ENST00000378244 WNT7AO00755 349 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 FOXP1Q9H334 677 aaPredicted RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 KBTBD13C9JR72 458 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 CTAGE5O15320 804 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 ASGR1P07306 291 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 GJA9P57773 515 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 BECN1Q14457 450 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 NBR1Q14596 966 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 ZNF577Q9BSK1 485 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
DEPDC4-202ENST00000378244 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 SLC37A4O43826 429 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 KCNA2P16389 499 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 PDCP20941 246 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 ICAM3P32942 547 aa13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
DEPDC4-202ENST00000378244 LENG9Q96B70 501 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms