RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 SEMA3FQ13275 785 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 NNTQ13423 1086 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 ALS2CLQ60I27 953 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 TXNRD3Q86VQ6 643 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 NOX5Q96PH1 765 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 SAP30BPQ9UHR5 308 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF1-204ENST00000378152 LCA5LO95447 670 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 NEK8Q86SG6 692 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 SH3RF3Q8TEJ3 882 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 LAMB1P07942 1786 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 HEXIM1O94992 359 aaKnown RBP17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 APBA1Q02410 837 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 GRB10Q13322 594 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 SETDB2Q96T68 719 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
ARHGEF1-204ENST00000378152 PPP1R2P41236 205 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 ARID5AQ03989 594 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 CFAP221Q4G0U5 840 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 CFAP58Q5T655 872 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 PDXDC1Q6P996 788 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 USP17L2Q6R6M4 530 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 CCDC84Q86UT8 332 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 CAVIN3Q969G5 261 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 ZMYND12Q9H0C1 365 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 PALM3A6NDB9 673 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 INPP5BP32019 993 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 TRADDQ15628 312 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 TEX2Q8IWB9 1127 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 PALMO75781 387 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 EPB41P11171 864 aaKnown RBP17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 GUCY1A3Q02108 690 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 MMS22LQ6ZRQ5 1243 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 IFT20Q8IY31 132 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
ARHGEF1-204ENST00000378152 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 RUBCNQ92622 972 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 RNPC3Q96LT9 517 aaKnown RBP17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 KRT12Q99456 494 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 POTEMA6NI47 508 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 ZNF233A6NK53 670 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 PJA2O43164 708 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 KCNMA1Q12791 1236 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 DIXDC1Q155Q3 683 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 ASTE1Q2TB18 679 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 HGSNATQ68CP4 663 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 UNC13DQ70J99 1090 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 IQCDQ96DY2 449 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 PNMA5Q96PV4 448 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
ARHGEF1-204ENST00000378152 NRXN2Q9P2S2 1712 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 GUCY2CP25092 1073 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 SKOR1P84550 965 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 MAPKAPK5Q8IW41 473 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 PIGSQ96S52 555 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
ARHGEF1-204ENST00000378152 RFC4P35249 363 aa17.64■□□□□ 0.42
ARHGEF1-204ENST00000378152 RPS8P62241 208 aaKnown RBP17.64■□□□□ 0.42
ARHGEF1-204ENST00000378152 EHHADHQ08426 723 aa17.64■□□□□ 0.42
ARHGEF1-204ENST00000378152 LRRC55Q6ZSA7 311 aa17.64■□□□□ 0.42
ARHGEF1-204ENST00000378152 TBC1D7Q9P0N9 293 aa17.64■□□□□ 0.42
ARHGEF1-204ENST00000378152 FGFR1OPO95684 399 aaKnown RBP17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 CALCRLQ16602 461 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 PTPROQ16827 1216 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 TPTE2Q6XPS3 522 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 KCNK18Q7Z418 384 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 CASKIN2Q8WXE0 1202 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 SLC37A4O43826 429 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 TLR2O60603 784 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 KLRC1P26715 233 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 GNA11P29992 359 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 POLR2FP61218 127 aaKnown RBP17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 CCDC40Q4G0X9 1142 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 KLHL7Q8IXQ5 586 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 DDX12PQ92771 950 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 GDF3Q9NR23 364 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 CAPN7Q9Y6W3 813 aa17.64■□□□□ 0.41
ARHGEF1-204ENST00000378152 TDP2O95551 362 aa17.63■□□□□ 0.41
ARHGEF1-204ENST00000378152 TNFRSF8P28908 595 aa17.63■□□□□ 0.41
ARHGEF1-204ENST00000378152 HNRNPH1P31943 449 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-204ENST00000378152 PAK2Q13177 524 aa17.63■□□□□ 0.41
ARHGEF1-204ENST00000378152 GRIK5Q16478 980 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms