RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ANTXR2P58335 489 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 MYL7Q01449 175 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 CARD10Q9BWT7 1032 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 MLXIPQ9HAP2 919 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 NPHP4O75161 1426 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 DKC1O60832 514 aaKnown RBP eCLIP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 PSMC2P35998 433 aaKnown RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 LMNB2Q03252 620 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 ZKSCAN8Q15776 578 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 SPATA4Q8NEY3 305 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 RASGRP4Q8TDF6 673 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 IGDCC4Q8TDY8 1250 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 TBCKQ8TEA7 893 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 NCAPGQ9BPX3 1015 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 SLITRK6Q9H5Y7 841 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 TAF6LQ9Y6J9 622 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 UFL1O94874 794 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 GBP5Q96PP8 586 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 MAP3K14Q99558 947 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 MAK16Q9BXY0 300 aaKnown RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 GYPCP04921 128 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ADCY8P40145 1251 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 STRN3Q13033 797 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PLCB4Q15147 1175 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PTPAQ15257 358 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 NFRKBQ6P4R8 1299 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 FNBP1Q96RU3 617 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PDS5AQ29RF7 1337 aaKnown RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM66O15016 1216 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PDE6CP51160 858 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 CDC37Q16543 378 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PDXDC1Q6P996 788 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 C3orf20Q8ND61 904 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ZNF622Q969S3 477 aaKnown RBP eCLIP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 CCDC160A6NGH7 325 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 F8W031 263 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 PODXLO00592 558 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ECEL1O95672 775 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 RPS8P62241 208 aaKnown RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 DYNLL1P63167 89 aaKnown RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ANKRD20A3Q5VUR7 823 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ANKRD35Q8N283 1001 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 SMCR8Q8TEV9 937 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 MAGOHBQ96A72 148 aaKnown RBP9.55□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 VPS37BQ9H9H4 285 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 KLC4Q9NSK0 619 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 SLC1A4P43007 532 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 NCAPHQ15003 741 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 E2F5Q15329 346 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 TRAPPC11Q7Z392 1133 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ADSSL1Q8N142 457 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 LRRC8CQ8TDW0 803 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 HVCN1Q96D96 273 aa9.55□□□□□ -0.88
PCDH9-202ENST00000377865 ZBTB22O15209 634 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 CHMP2AO43633 222 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 ATP5HO75947 161 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 ANXA13P27216 316 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 CASP1P29466 404 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 MDH1P40925 334 aaKnown RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 FXR1P51114 621 aaKnown RBP eCLIP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 LRRC31Q6UY01 552 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 ENAHQ8N8S7 591 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 TCP11Q8WWU5 503 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 KLHL29Q96CT2 875 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 MXD3Q9BW11 206 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 BTG4Q9NY30 223 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RAB21Q9UL25 225 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 FOSP01100 380 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RAD54LQ92698 747 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 ARHGEF10LQ9HCE6 1279 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RASGRF2O14827 1237 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R37O75864 691 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 LMNAP02545 664 aaKnown RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RBBP5Q15291 538 aaKnown RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 UAP1Q16222 522 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 CCDC14Q49A88 953 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 CFAP157Q5JU67 520 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 AGBL2Q5U5Z8 902 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R2P3Q6NXS1 205 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM65Q6PJ69 517 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 PNKPQ96T60 521 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 KCNG1Q9UIX4 513 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 FRMPD2Q68DX3 1309 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms