RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 ITGA6P23229 1130 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 KCNJ2P63252 427 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 FAM133BQ5BKY9 247 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 CHMP6Q96FZ7 201 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 RNF14Q9UBS8 474 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 AKAP11Q9UKA4 1901 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 LINGO3P0C6S8 592 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 ABL2P42684 1182 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 EHHADHQ08426 723 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 AGBL2Q5U5Z8 902 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 C4orf32Q8N8J7 132 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC197Q8NCU1 140 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 UBLCP1Q8WVY7 318 aaPredicted RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 BAP1Q92560 729 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 P2RX5Q93086 422 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 ZNF317Q96PQ6 595 aaPredicted RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 XPO6Q96QU8 1125 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 TMEM59LQ9UK28 342 aa17.23■□□□□ 0.35
CSNK1A1-202ENST00000377843 A8MUI8 341 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 XBP1P17861 261 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 ERICH2A1L162 156 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 PHKA1P46020 1223 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 STK4Q13043 487 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 SEC23AQ15436 765 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 HGSNATQ68CP4 663 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 RUFY4Q6ZNE9 571 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 HPS3Q969F9 1004 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
CSNK1A1-202ENST00000377843 GRID2IPA4D2P6 1211 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 SNUPNO95149 360 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 FCER1AP12319 257 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCNE1P24864 410 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 ZNF268Q14587 947 aaPredicted RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 MEI1Q5TIA1 1274 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 CORO1CQ9ULV4 474 aaPredicted RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 COL18A1P39060 1754 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 ALADP13716 330 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 KLRC1P26715 233 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 RNF10Q8N5U6 811 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 ABCF3Q9NUQ8 709 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 NOP53Q9NZM5 478 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 PNMA2Q9UL42 364 aa17.21■□□□□ 0.35
CSNK1A1-202ENST00000377843 TNKSO95271 1327 aa17.21■□□□□ 0.34
CSNK1A1-202ENST00000377843 BHMG1C9JSJ3 638 aaPredicted RBP17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 CTNND1O60716 968 aaKnown RBP17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 MAGEB6Q8N7X4 407 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 GSTA1P08263 222 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 RAB27AP51159 221 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 ALDH5A1P51649 535 aaPredicted RBP17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 RWDD2BP57060 319 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 KRT71Q3SY84 523 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 ERICH1Q86X53 443 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 GGT7Q9UJ14 662 aa17.2■□□□□ 0.34
CSNK1A1-202ENST00000377843 PECAM1P16284 738 aaPredicted RBP17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 TNNC1P63316 161 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 PIGWQ7Z7B1 504 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 LCORLQ8N3X6 602 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 LRRC45Q96CN5 670 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 PSMD1Q99460 953 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 GOLPH3Q9H4A6 298 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 HOMER3Q9NSC5 361 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 LONP1P36776 959 aaKnown RBP17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 RCAN1P53805 252 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 BLMHQ13867 455 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 PTPROQ16827 1216 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 LRRC34Q8IZ02 419 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 IFNL2Q8IZJ0 200 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 TTLL11Q8NHH1 800 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 TLCD1Q96CP7 247 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 AP1M1Q9BXS5 423 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 PACSIN1Q9BY11 444 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 SEMA6BQ9H3T3 888 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 KBTBD4Q9NVX7 518 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 TIAM2Q8IVF5 1701 aa17.19■□□□□ 0.34
CSNK1A1-202ENST00000377843 SART1O43290 800 aaKnown RBP17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 TLR2O60603 784 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 NAB2Q15742 525 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 PDXDC1Q6P996 788 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms