RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 PAPD7Q5XG87 772 aaKnown RBP18.01■□□□□ 0.47
TRIM27-202ENST00000377199 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
TRIM27-202ENST00000377199 TSG101Q99816 390 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 PLAGL2Q9UPG8 496 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 PPEF1O14829 653 aaPredicted RBP18■□□□□ 0.47
TRIM27-202ENST00000377199 RGL2O15211 777 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 MAGEA1P43355 309 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 USH1GQ495M9 461 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 CRY2Q49AN0 593 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18■□□□□ 0.47
TRIM27-202ENST00000377199 SALL4Q9UJQ4 1053 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 GAKO14976 1311 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 TACC1O75410 805 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 BBOX1O75936 387 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 GUF1Q8N442 669 aaKnown RBP18■□□□□ 0.47
TRIM27-202ENST00000377199 DBNDD1Q9H9R9 158 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
TRIM27-202ENST00000377199 FAM26FQ5R3K3 315 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 CCDC181Q5TID7 509 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
TRIM27-202ENST00000377199 MYH1P12882 1939 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 ESYT2A0FGR8 921 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 TULP1O00294 542 aaPredicted RBP17.99■□□□□ 0.47
TRIM27-202ENST00000377199 SHMT1P34896 483 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 SLC1A4P43007 532 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 POLR2FP61218 127 aaKnown RBP17.99■□□□□ 0.47
TRIM27-202ENST00000377199 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 DNAAF5Q86Y56 855 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 CERS3Q8IU89 383 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 PCDHA1Q9Y5I3 950 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 MRPL12P52815 198 aaKnown RBP17.99■□□□□ 0.47
TRIM27-202ENST00000377199 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.99■□□□□ 0.47
TRIM27-202ENST00000377199 GPBP1Q86WP2 473 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 RIC8AQ9NPQ8 531 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 BMP2KQ9NSY1 1161 aaPredicted RBP17.99■□□□□ 0.47
TRIM27-202ENST00000377199 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
TRIM27-202ENST00000377199 PVALEFA0A1B0GWK0 134 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 EPS15P42566 896 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 GABPAQ06546 454 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 POTEGQ6S5H5 508 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 POTEEQ6S8J3 1075 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 SLC30A10Q6XR72 485 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 LSM14BQ9BX40 385 aaKnown RBP17.98■□□□□ 0.47
TRIM27-202ENST00000377199 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 PPP1R2P41236 205 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 RAPGEF1Q13905 1077 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 CDC42EP5Q6NZY7 148 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 C15orf52Q6ZUT6 534 aaKnown RBP17.98■□□□□ 0.47
TRIM27-202ENST00000377199 CCDC84Q86UT8 332 aaPredicted RBP17.98■□□□□ 0.47
TRIM27-202ENST00000377199 FAM163AQ96GL9 167 aaPredicted RBP17.98■□□□□ 0.47
TRIM27-202ENST00000377199 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 LRRC1Q9BTT6 524 aa17.98■□□□□ 0.47
TRIM27-202ENST00000377199 ZBTB5O15062 677 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 RNF40O75150 1001 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 FGFR1OPO95684 399 aaKnown RBP17.97■□□□□ 0.47
TRIM27-202ENST00000377199 NT5C2P49902 561 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 WDR93Q6P2C0 686 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 TRIM58Q8NG06 486 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 SNX12Q9UMY4 172 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 PACSIN2Q9UNF0 486 aaPredicted RBP17.97■□□□□ 0.47
TRIM27-202ENST00000377199 UTRNP46939 3433 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 GDF11O95390 407 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 TUBB4BP68371 445 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 CYP4A11Q02928 519 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 QRICH1Q2TAL8 776 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 PRR16Q569H4 304 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 DMGDHQ9UI17 866 aaKnown RBP17.97■□□□□ 0.47
TRIM27-202ENST00000377199 COL4A3BPQ9Y5P4 624 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 A0A1W2PQJ5 194 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 LRRC63Q05C16 580 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 KCNMA1Q12791 1236 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 PDIA5Q14554 519 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 SEPT12Q8IYM1 358 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 DNAJC19Q96DA6 116 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 MTMR8Q96EF0 704 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 ALS2CR12Q96Q35 445 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 RABEP2Q9H5N1 569 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 JRKLQ9Y4A0 524 aa17.97■□□□□ 0.47
TRIM27-202ENST00000377199 MYH10P35580 1976 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 TRIM37O94972 964 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 FKBP3Q00688 224 aaKnown RBP17.96■□□□□ 0.47
TRIM27-202ENST00000377199 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.471e-8■■■■□ 21.6
TRIM27-202ENST00000377199 LEKR1Q6ZMV7 388 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 CREG2Q8IUH2 290 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 SELENOOQ9BVL4 669 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 ACBD3Q9H3P7 528 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 FTCDO95954 541 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 BAP1Q92560 729 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms