RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
SSX3-202ENST00000376893 MYBBP1AQ9BQG0 1328 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 C4BP0C0L5 1744 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 A0A087WZG4 1122 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 ZNF862O60290 1169 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 DLX3O60479 287 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 CT47B1P0C2W7 299 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 GRIA2P42262 883 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 RECQLP46063 649 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 ARL4DP49703 201 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 SETQ01105 290 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 POU4F3Q15319 338 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 MAPRE1Q15691 268 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 TXNRD1Q16881 649 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 MTHFSDQ2M296 383 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 ZNF468Q5VIY5 522 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 ZCCHC8Q6NZY4 707 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 FAM35AQ86V20 835 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 FCHSD1Q86WN1 690 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 TRIM59Q8IWR1 403 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 FAM13CQ8NE31 585 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 COG1Q8WTW3 980 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 KCTD13Q8WZ19 329 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 ABHD17AQ96GS6 310 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 CCDC74BQ96LY2 380 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 UBE2OQ9C0C9 1292 aaKnown RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 EMC9Q9Y3B6 208 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 MAP3K5Q99683 1374 aa7.28□□□□□ -1.24
SSX3-202ENST00000376893 SIPA1L3O60292 1781 aaPredicted RBP7.28□□□□□ -1.24
SSX3-202ENST00000376893 CICQ96RK0 1608 aaPredicted RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 COL5A3P25940 1745 aaPredicted RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 FAM86C2PA6NEL3 165 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 FANCGO15287 622 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 ULK1O75385 1050 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 CLEC3AO75596 197 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 TCEA3O75764 348 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 PRKD3O94806 890 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 UBOX5O94941 541 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 SNUPNO95149 360 aaKnown RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 EPHA1P21709 976 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 POLR2BP30876 1174 aaKnown RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 MAN1A1P33908 653 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 ERVK-24P63145 666 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 IRX6P78412 446 aaPredicted RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 GSTM4Q03013 218 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 C19orf57Q0VDD7 668 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 TCIRG1Q13488 830 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 PTPN21Q16825 1174 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 FAM83BQ5T0W9 1011 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 ERAP2Q6P179 960 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 ELMSAN1Q6PJG2 1045 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 RIPOR1Q6ZS17 1223 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 IFNL2Q8IZJ0 200 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 CPA6Q8N4T0 437 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 WNK4Q96J92 1243 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 ELAC2Q9BQ52 826 aaKnown RBP7.27□□□□□ -1.25
SSX3-202ENST00000376893 TRIM33Q9UPN9 1127 aa7.27□□□□□ -1.25
SSX3-202ENST00000376893 UBR2Q8IWV8 1755 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 KLRG2A4D1S0 409 aaPredicted RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 AQP7O14520 342 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 SCG5P05408 212 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 HSP90AA1P07900 732 aaKnown RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 FGFR3P22607 806 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 BDNFP23560 247 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 CAP2P40123 477 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 GJA9P57773 515 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 ERVK-21P61565 698 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 OCRLQ01968 901 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 SAFBQ15424 915 aaKnown RBP eCLIP7.26□□□□□ -1.25
SSX3-202ENST00000376893 PLEKHO1Q53GL0 409 aaPredicted RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 C1orf141Q5JVX7 400 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 IQSEC1Q6DN90 963 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 DDX53Q86TM3 631 aaKnown RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 PHACTR4Q8IZ21 702 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 ARHGEF39Q8N4T4 335 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 MYRIPQ8NFW9 859 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 PIGBQ92521 554 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 GJA10Q969M2 543 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 FUBP3Q96I24 572 aaKnown RBP eCLIP7.26□□□□□ -1.25
SSX3-202ENST00000376893 PHACTR3Q96KR7 559 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 PDGFDQ9GZP0 370 aaPredicted RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 SMG9Q9H0W8 520 aaKnown RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 PRKRIP1Q9H875 184 aaPredicted RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 DDX21Q9NR30 783 aaKnown RBP eCLIP7.26□□□□□ -1.25
SSX3-202ENST00000376893 SH2B1Q9NRF2 756 aaPredicted RBP7.26□□□□□ -1.25
SSX3-202ENST00000376893 ATG3Q9NT62 314 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
SSX3-202ENST00000376893 TJP2Q9UDY2 1190 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms