RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 ANKRD65E5RJM6 399 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 RAD21O60216 631 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 AKR1B1P15121 316 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 ZCWPW2Q504Y3 356 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 PDXDC1Q6P996 788 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 ZNF572Q7Z3I7 529 aaPredicted RBP13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 MS4A14Q96JA4 679 aa13.74□□□□□ -0.21
TNFSF13B-201ENST00000375887 IL1R1P14778 569 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 PRLRP16471 622 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 RFC4P35249 363 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 SND1Q7KZF4 910 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 CRACR2AQ9BSW2 395 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 ZNF831Q5JPB2 1677 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 SLC16A2P36021 539 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 COASYQ13057 564 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 ORC2Q13416 577 aaPredicted RBP13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 KRT79Q5XKE5 535 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 POLLQ9UGP5 575 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 RSPH14Q9UHP6 348 aa13.73□□□□□ -0.21
TNFSF13B-201ENST00000375887 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 PJA2O43164 708 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 IVLP07476 585 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 SNHG28P0DPA3 235 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 PRR5LQ6MZQ0 368 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 ADGRF4Q8IZF3 695 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 ABCB11O95342 1321 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 GOLGA6BA6NDN3 693 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 TRAF5O00463 557 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 ITIH3Q06033 890 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 GABPAQ06546 454 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 EHD4Q9H223 541 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 DDX4Q9NQI0 724 aaKnown RBP13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 HYOU1Q9Y4L1 999 aa13.72□□□□□ -0.21
TNFSF13B-201ENST00000375887 GAKO14976 1311 aa13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 NELFCDQ8IXH7 590 aa13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
TNFSF13B-201ENST00000375887 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 E9PMD0 336 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 PLCG2P16885 1265 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 TCP1P17987 556 aaKnown RBP13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 NGLY1Q96IV0 654 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 RIC8AQ9NPQ8 531 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 PANK4Q9NVE7 773 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 PCDHA2Q9Y5H9 948 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 COL4A3BPQ9Y5P4 624 aa13.71□□□□□ -0.22
TNFSF13B-201ENST00000375887 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 POLR2FP61218 127 aaKnown RBP13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZNF543Q08ER8 600 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 SHROOM1Q2M3G4 852 aaPredicted RBP13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 ASPRV1Q53RT3 343 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 ALS2CR12Q96Q35 445 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 GGA1Q9UJY5 639 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZSCAN5CA6NGD5 496 aaPredicted RBP13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 RBAK-RBAKDNI3L0D1 243 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 ARID5AQ03989 594 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 PSMD2Q13200 908 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM26FQ5R3K3 315 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 RPGRQ92834 1020 aaKnown RBP13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 STIM2Q9P246 746 aa13.7□□□□□ -0.22
TNFSF13B-201ENST00000375887 GOLGA6CA6NDK9 693 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 GLI1P08151 1106 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms