RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FAM153BP0C7A2 387 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 TCP1P17987 556 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 PRPHP41219 470 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 SLC1A4P43007 532 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 EPHB4P54760 987 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 PDE4CQ08493 712 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 FAM153CQ494X1 144 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 SBK1Q52WX2 424 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 CENPPQ6IPU0 288 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 C8orf74Q6P047 294 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 SP8Q8IXZ3 490 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 GLIS3Q8NEA6 775 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 ALS2CR12Q96Q35 445 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 CUEDC2Q9H467 287 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 FAM153AQ9UHL3 310 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 ATP6V0A2Q9Y487 856 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 HSF2BPO75031 334 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 CARSP49589 748 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 ITIH3Q06033 890 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 GRIK5Q16478 980 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 KLHDC7AQ5VTJ3 777 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 CNNM4Q6P4Q7 775 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 IFT81Q8WYA0 676 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 RUFY1Q96T51 708 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 NRXN2Q9P2S2 1712 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 SHTN1A0MZ66 631 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 MYMKA6NI61 221 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 H0YIN7 160 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 LAD1O00515 517 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 LCA5LO95447 670 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 TXKP42681 527 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 PAFAH1B1P43034 410 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 NAPAP54920 295 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 RNASE9P60153 205 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 LRRC41Q15345 812 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 FBXW10Q5XX13 1052 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 DAGLBQ8NCG7 672 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 BAP1Q92560 729 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 VAT1LQ9HCJ6 419 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 NFU1Q9UMS0 254 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 ZEB2O60315 1214 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 EMBQ6PCB8 327 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 AK8Q96MA6 479 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 NLRC4Q9NPP4 1024 aa15.61■□□□□ 0.09
CLCNKA-202ENST00000375692 SMCO2A6NFE2 343 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 ALDH1B1P30837 517 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 SEMA3FQ13275 785 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TRADDQ15628 312 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 ALS2CLQ60I27 953 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TMED8Q6PL24 325 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 GBP6Q6ZN66 633 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 CCDC43Q96MW1 224 aaKnown RBP15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 MAGEF1Q9HAY2 307 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 KLRF2D3W0D1 207 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TSPY3P0CV98 308 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TSPY8P0CW00 308 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 ATP2B4P23634 1241 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 GNAQP50148 359 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 GUCY2FP51841 1108 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 AMPD3Q01432 767 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 PPARDQ03181 441 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 NNTQ13423 1086 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 R3HDM1Q15032 1099 aaKnown RBP15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 MAN2A1Q16706 1144 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 TANGO6Q9C0B7 1094 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 EPB41L5Q9HCM4 733 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 BLOC1S4Q9NUP1 217 aa15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 BIN2Q9UBW5 565 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-202ENST00000375692 EPB41P11171 864 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 APBA1Q02410 837 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 GRB10Q13322 594 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 NONOQ15233 471 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 ASTE1Q2TB18 679 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 SV2BQ7L1I2 683 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 CAVIN3Q969G5 261 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 FAM107BQ9H098 131 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 CD209Q9NNX6 404 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 TMEM260Q9NX78 707 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 ZNF233A6NK53 670 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 NDUFAB1O14561 156 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 FTCDO95954 541 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 GUCY2CP25092 1073 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 KCTD19Q17RG1 926 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 HGSNATQ68CP4 663 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 GALNT17Q6IS24 598 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 CCDC125Q86Z20 511 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 TBCKQ8TEA7 893 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 SH3RF3Q8TEJ3 882 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 NOX5Q96PH1 765 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms