RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NBNO60934 754 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 CKBP12277 381 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 DEFB103AP81534 67 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 PTK7Q13308 1070 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 IKBKEQ14164 716 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 ADCK5Q3MIX3 580 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 USH1GQ495M9 461 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 CYB5R4Q7L1T6 521 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
LSM2-208ENST00000375661 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 SYTL5Q8TDW5 730 aaPredicted RBP14.11□□□□□ -0.15
LSM2-208ENST00000375661 GDPD5Q8WTR4 605 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
LSM2-208ENST00000375661 HDAC6Q9UBN7 1215 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 SNX14Q9Y5W7 946 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.1□□□□□ -0.15
LSM2-208ENST00000375661 F2P00734 622 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 ANTXR2P58335 489 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 CHMP4BP1P59074 171 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 TRDNQ13061 729 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 SEPT14Q6ZU15 432 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 SPRED2Q7Z698 418 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 TAAR1Q96RJ0 339 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 ZKSCAN3Q9BRR0 538 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 UBE2ZQ9H832 354 aaPredicted RBP14.1□□□□□ -0.15
LSM2-208ENST00000375661 SUGCTQ9HAC7 445 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 DDX41Q9UJV9 622 aaKnown RBP14.1□□□□□ -0.15
LSM2-208ENST00000375661 BRWD1Q9NSI6 2320 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
LSM2-208ENST00000375661 LINC01553A4QN01 128 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 HAS3O00219 553 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 EIF5BO60841 1220 aaKnown RBP14.09□□□□□ -0.15
LSM2-208ENST00000375661 EIF3JO75822 258 aaKnown RBP14.09□□□□□ -0.15
LSM2-208ENST00000375661 PSEN2P49810 448 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 CDC37Q16543 378 aaPredicted RBP14.09□□□□□ -0.15
LSM2-208ENST00000375661 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 RALYLQ86SE5 291 aaKnown RBP14.09□□□□□ -0.15
LSM2-208ENST00000375661 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 RMDN3Q96TC7 470 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 C11orf16Q9NQ32 467 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 MRPL11Q9Y3B7 192 aaKnown RBP14.09□□□□□ -0.15
LSM2-208ENST00000375661 INSL6Q9Y581 213 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 EMSYQ7Z589 1322 aa14.09□□□□□ -0.15
LSM2-208ENST00000375661 GOLGA8HP0CJ92 632 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 HOXD8P13378 290 aaPredicted RBP14.08□□□□□ -0.16
LSM2-208ENST00000375661 MFSD10Q14728 455 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 KIAA0753Q2KHM9 967 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
LSM2-208ENST00000375661 PUS10Q3MIT2 529 aaKnown RBP14.08□□□□□ -0.16
LSM2-208ENST00000375661 ARHGEF16Q5VV41 709 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 KCNV1Q6PIU1 500 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 TRAF7Q6Q0C0 670 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 CHST3Q7LGC8 479 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 PNMA1Q8ND90 353 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 ANKS1AQ92625 1134 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 NEK1Q96PY6 1258 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 ZSCAN10Q96SZ4 725 aaPredicted RBP14.08□□□□□ -0.16
LSM2-208ENST00000375661 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
LSM2-208ENST00000375661 COL20A1Q9P218 1284 aa14.08□□□□□ -0.16
LSM2-208ENST00000375661 COL4A6Q14031 1691 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 PRR33A8MZF0 331 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 LGR5O75473 907 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 AMHP03971 560 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 GHRHRQ02643 423 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 KRT32Q14532 448 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 SEC23AQ15436 765 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 ZNF618Q5T7W0 954 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 TMCO2Q7Z6W1 182 aaPredicted RBP14.07□□□□□ -0.16
LSM2-208ENST00000375661 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 FAM178BQ8IXR5 827 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
LSM2-208ENST00000375661 ADGRF4Q8IZF3 695 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 ENAHQ8N8S7 591 aaPredicted RBP14.07□□□□□ -0.16
LSM2-208ENST00000375661 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 TBC1D5Q92609 795 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
LSM2-208ENST00000375661 ALG1Q9BT22 464 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 KAT14Q9H8E8 782 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 MRVI1Q9Y6F6 885 aa14.07□□□□□ -0.16
LSM2-208ENST00000375661 NR3C2P08235 984 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 CPA1P15085 419 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 MCM5P33992 734 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 HTRA4P83105 476 aaPredicted RBP14.06□□□□□ -0.16
LSM2-208ENST00000375661 EXOSC10Q01780 885 aaKnown RBP14.06□□□□□ -0.16
LSM2-208ENST00000375661 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
LSM2-208ENST00000375661 PTPROQ16827 1216 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 TCTN1Q2MV58 587 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 GJD3Q8N144 294 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms