RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 GIMAP8Q8ND71 665 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
MCF2L-202ENST00000375597 STXBP3O00186 592 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 ARHGAP44Q17R89 818 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 TTMPQ5BVD1 217 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 DNAJC7Q99615 494 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
MCF2L-202ENST00000375597 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 GPBP1Q86WP2 473 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 THAP9Q9H5L6 903 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 A0A087X0T9 212 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 POTEFA5A3E0 1075 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 LRRN2O75325 713 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 PRPF6O94906 941 aaKnown RBP13□□□□□ -0.33
MCF2L-202ENST00000375597 FAM228BP0C875 321 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 POTEIP0CG38 1075 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 KRT13P13646 458 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
MCF2L-202ENST00000375597 MIIPQ5JXC2 388 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 POTEGQ6S5H5 508 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF507Q8TCN5 953 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 KAT2BQ92831 832 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
MCF2L-202ENST00000375597 ITIH6Q6UXX5 1313 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 SLC9A1P19634 815 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 BRIP1Q9BX63 1249 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 DDX39AO00148 427 aaKnown RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 BAG3O95817 575 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 MCM3P25205 808 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 CDK8P49336 464 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 GTF2IP78347 998 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 HDLBPQ00341 1268 aaKnown RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 CFAP221Q4G0U5 840 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 ICE2Q659A1 982 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 HAUS3Q68CZ6 603 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF512BQ96KM6 892 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 CD248Q9HCU0 757 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
MCF2L-202ENST00000375597 AMACRQ9UHK6 382 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 PLAAQ9Y263 795 aa12.99□□□□□ -0.33
MCF2L-202ENST00000375597 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 CTNNA1P35221 906 aaKnown RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 MYO1AQ9UBC5 1043 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 SEMA3EO15041 775 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 OPA1O60313 960 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 ADAM9Q13443 819 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 PRR16Q569H4 304 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 DAAM2Q86T65 1068 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 THOC1Q96FV9 657 aaKnown RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-202ENST00000375597 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 RAD51CO43502 376 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 VPS41P49754 854 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 ECM1Q16610 540 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 ATP8A1Q9Y2Q0 1164 aa12.98□□□□□ -0.33
MCF2L-202ENST00000375597 RPSAP08865 295 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 ITGA4P13612 1032 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 GNA11P29992 359 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 CORO7P57737 925 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 KRT71Q3SY84 523 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 GFPT2O94808 682 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms