RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 NID2Q14112 1375 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 RBAK-RBAKDNI3L0D1 243 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 UBA1P22314 1058 aaKnown RBP17.96■□□□□ 0.47
SDHB-201ENST00000375499 CYP2C18P33260 490 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.47
SDHB-201ENST00000375499 NBPF20Q3BBV1 942 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 HEATR3Q7Z4Q2 680 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 KAT2BQ92831 832 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 TIFAQ96CG3 184 aa17.96■□□□□ 0.47
SDHB-201ENST00000375499 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
SDHB-201ENST00000375499 NAP1L2Q9ULW6 460 aaPredicted RBP17.96■□□□□ 0.47
SDHB-201ENST00000375499 SCN5AQ14524 2016 aa17.95■□□□□ 0.46
SDHB-201ENST00000375499 TLR3O15455 904 aaKnown RBP17.95■□□□□ 0.46
SDHB-201ENST00000375499 COL9A1P20849 921 aa17.95■□□□□ 0.46
SDHB-201ENST00000375499 PPIGQ13427 754 aaKnown RBP eCLIP17.95■□□□□ 0.46
SDHB-201ENST00000375499 MFSD5Q6N075 450 aa17.95■□□□□ 0.46
SDHB-201ENST00000375499 EMID1Q96A84 441 aaPredicted RBP17.95■□□□□ 0.46
SDHB-201ENST00000375499 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
SDHB-201ENST00000375499 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
SDHB-201ENST00000375499 TELO2Q9Y4R8 837 aa17.95■□□□□ 0.46
SDHB-201ENST00000375499 GGPS1O95749 300 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 CYP2C9P11712 490 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 CSF2RAP15509 400 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 METAP2P50579 478 aaKnown RBP eCLIP17.94■□□□□ 0.46
SDHB-201ENST00000375499 RCAN1P53805 252 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 FGD1P98174 961 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 HSDL1Q3SXM5 330 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 CUL5Q93034 780 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
SDHB-201ENST00000375499 WNT8AQ9H1J5 351 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 HIPK3Q9H422 1215 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 PSTPIP2Q9H939 334 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
SDHB-201ENST00000375499 TANC1Q9C0D5 1861 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 EYSQ5T1H1 3165 aa17.94■□□□□ 0.46
SDHB-201ENST00000375499 STXBP3O00186 592 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 ADAMTS3O15072 1205 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 PPFIA3O75145 1194 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 TOB2Q14106 344 aaPredicted RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 FAM47CQ5HY64 1035 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 CELF3Q5SZQ8 465 aaKnown RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 PPTC7Q8NI37 304 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 VWCEQ96DN2 955 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 PGBD1Q96JS3 809 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 CTAGE1Q96RT6 745 aa17.93■□□□□ 0.46
SDHB-201ENST00000375499 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
SDHB-201ENST00000375499 KPNA6O60684 536 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 ACRP10323 421 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 NAPAP54920 295 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 PCNX4Q63HM2 1172 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
SDHB-201ENST00000375499 TMEM199Q8N511 208 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.467e-7■□□□□ 8.1
SDHB-201ENST00000375499 LARP6Q9BRS8 491 aaKnown RBP17.92■□□□□ 0.46
SDHB-201ENST00000375499 UPF3BQ9BZI7 483 aaKnown RBP17.92■□□□□ 0.46
SDHB-201ENST00000375499 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 CDH23Q9H251 3354 aa17.92■□□□□ 0.46
SDHB-201ENST00000375499 SPTBN5Q9NRC6 3674 aaKnown RBP17.92■□□□□ 0.46
SDHB-201ENST00000375499 F2P00734 622 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 PSMA5P28066 241 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 ICAM3P32942 547 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 CCL23P55773 120 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 MRPS5P82675 430 aaKnown RBP17.91■□□□□ 0.46
SDHB-201ENST00000375499 NTRK3Q16288 839 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 DGKDQ16760 1214 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 TMEM240Q5SV17 173 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 NFRKBQ6P4R8 1299 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 ASB2Q96Q27 587 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 SEZ6LQ9BYH1 1024 aa17.91■□□□□ 0.46
SDHB-201ENST00000375499 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
SDHB-201ENST00000375499 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 SPATA31C2B4DYI2 1134 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 HAS3O00219 553 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 TGFB3P10600 412 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 EVCP57679 992 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 HIC1Q14526 733 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 RAB30Q15771 203 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 PKN1Q16512 942 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 GDF6Q6KF10 455 aaPredicted RBP17.9■□□□□ 0.46
SDHB-201ENST00000375499 PSRC1Q6PGN9 363 aaPredicted RBP17.9■□□□□ 0.46
SDHB-201ENST00000375499 KCNV1Q6PIU1 500 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 PHKBQ93100 1093 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 SCLYQ96I15 445 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 MTIF3Q9H2K0 278 aaKnown RBP17.9■□□□□ 0.46
SDHB-201ENST00000375499 RIC8AQ9NPQ8 531 aa17.9■□□□□ 0.46
SDHB-201ENST00000375499 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms