RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NOD2Q9HC29 1040 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 BAIAP2L1Q9UHR4 511 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 REXO2Q9Y3B8 237 aaKnown RBP13.4□□□□□ -0.26
C9orf3-203ENST00000375315 DNM1LO00429 736 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 POLR2DO15514 142 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 SCTRP47872 440 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 VAV2P52735 878 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 STX17P56962 302 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 ITIH3Q06033 890 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 LRRC1Q9BTT6 524 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 DMGDHQ9UI17 866 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 ZNF185O15231 689 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 ATP6V1G2O95670 118 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 CRKP46108 304 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 ACCSLQ4AC99 568 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 GLE1Q53GS7 698 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 BZW1Q7L1Q6 419 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 EBF2Q9HAK2 575 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 PPANQ9NQ55 473 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 FLT1P17948 1338 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 CLSTN1O94985 981 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 CRELD2Q6UXH1 353 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 CCHCR1Q8TD31 782 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
C9orf3-203ENST00000375315 SLC39A2Q9NP94 309 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 STIM2Q9P246 746 aa13.39□□□□□ -0.27
C9orf3-203ENST00000375315 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 RHBDL3P58872 404 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CACNA2D3Q8IZS8 1091 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 ATP6V1G3Q96LB4 118 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CHP1Q99653 195 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 ARPP21Q9UBL0 812 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-203ENST00000375315 ANKRD31Q8N7Z5 1873 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CHD4Q14839 1912 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CAND2O75155 1236 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 ARMC9Q7Z3E5 817 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
C9orf3-203ENST00000375315 TRIM58Q8NG06 486 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 HDAC7Q8WUI4 952 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 C15orf41Q9Y2V0 281 aa13.38□□□□□ -0.27
C9orf3-203ENST00000375315 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-203ENST00000375315 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 OPLAHO14841 1288 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 SPAG1Q07617 926 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 TRIM29Q14134 588 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 KRT40Q6A162 431 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CDC42EP5Q6NZY7 148 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CD302Q8IX05 232 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 STAMBPL1Q96FJ0 436 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 LAMA4Q16363 1823 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 GOLGA6L10A6NI86 522 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 KCNA3P22001 575 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CDC25AP30304 524 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CDK8P49336 464 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 ELF3P78545 371 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 GHRP10912 638 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 RAB27AP51159 221 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 SLC7A5Q01650 507 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-203ENST00000375315 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
C9orf3-203ENST00000375315 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms