RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 EXOC1LA0A1B0GW35 172 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 GPTP24298 496 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 AP3B1O00203 1094 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 PPP1R37O75864 691 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 PDP2Q9P2J9 529 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 PCDHA13Q9Y5I0 950 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 ABCB11O95342 1321 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 GOLGA8MH3BSY2 632 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 DMP1Q13316 513 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 TEX2Q8IWB9 1127 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 LGALS16A8MUM7 142 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 MCF2LO15068 1137 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 POTEAQ6S8J7 498 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
PTCH1-204ENST00000375290 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
PTCH1-204ENST00000375290 POLA2Q14181 598 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 GPBP1Q86WP2 473 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 KLC1Q07866 573 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 TTC19Q6DKK2 380 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 FAM178BQ8IXR5 827 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 SMCO2A6NFE2 343 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 DAPK3O43293 454 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 PKP1Q13835 747 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 ANKRD42Q8N9B4 389 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 MYBL1P10243 752 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 RASSF7Q02833 373 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 GNPTABQ3T906 1256 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 CRLF3Q8IUI8 442 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 ZSCAN20P17040 1043 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 PCYT1AP49585 367 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 PHKBQ93100 1093 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 PVALEFA0A1B0GWK0 134 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 KCNB1Q14721 858 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 DNAL1Q4LDG9 190 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 USP42Q9H9J4 1324 aaKnown RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 F8W8V4 182 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 TJP3O95049 919 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 FGAP02671 866 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 GJC1P36383 396 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 POLR2FP61218 127 aaKnown RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 MMEL1Q495T6 779 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 LRRC8BQ6P9F7 803 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 RAB44Q7Z6P3 723 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 DHX38Q92620 1227 aaKnown RBP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 CEP152O94986 1710 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 GYG2O15488 501 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 MED7O43513 233 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 NR2F2P24468 414 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 PPP2R5DQ14738 602 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-204ENST00000375290 ARHGEF40Q8TER5 1519 aa11.01□□□□□ -0.65
PTCH1-204ENST00000375290 CCDC17Q96LX7 622 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ATP8A1Q9Y2Q0 1164 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 TNKSO95271 1327 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ZNF233A6NK53 670 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 NLRP14Q86W24 1093 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 GSTA1P08263 222 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 APBB2Q92870 758 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 NLRC4Q9NPP4 1024 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 MAN1B1Q9UKM7 699 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 QRICH2Q9H0J4 1663 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 FAM107AO95990 144 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 KRR1Q13601 381 aaKnown RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 MAPRE2Q15555 327 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 DAB2IPQ5VWQ8 1189 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 PALD1Q9ULE6 856 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 GGCXP38435 758 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 CORO7P57737 925 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 FAM173BQ6P4H8 233 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 TRIML2Q8N7C3 387 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ANAPC5Q9UJX4 755 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms