RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GAP43P17677 238 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 SNX16P57768 344 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 PIGBQ92521 554 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 XDHP47989 1333 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 EIF3CLB5ME19 914 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CCDC188H7C350 402 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 SLC16A2P36021 539 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 GGCXP38435 758 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 IL9RQ01113 521 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 MECOMQ03112 1051 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 KRT26Q7Z3Y9 468 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 ENAHQ8N8S7 591 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 EIF3CQ99613 913 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 SPHKAPQ2M3C7 1700 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 SLCO1A2P46721 670 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 LIG4P49917 911 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 PTK2Q05397 1052 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 DLGAP5Q15398 846 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 HLFQ16534 295 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 NT5C1BQ96P26 610 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 POC1B-GALNT4F8VUJ3 575 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 DAPK3O43293 454 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 CTIFO43310 598 aaKnown RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 RPSAP08865 295 aaKnown RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 MAN1A1P33908 653 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 EIF3BP55884 814 aaKnown RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 CUL1Q13616 776 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 UNC13DQ70J99 1090 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 KCTD1Q719H9 257 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 GINS2Q9Y248 185 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 MEIS1O00470 390 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 ALAS1P13196 640 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 ALDH1B1P30837 517 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 NT5C2P49902 561 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 BFSP1Q12934 665 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 SCARF1Q14162 830 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 SUSD4Q5VX71 490 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 JPH2Q9BR39 696 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-203ENST00000375274 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 SH3GLB2Q9NR46 395 aa12.55□□□□□ -0.4
PTCH1-203ENST00000375274 PPP2R5DQ14738 602 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
PTCH1-203ENST00000375274 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 CHGBP05060 677 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 USP14P54578 494 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 MFAP3P55082 362 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 ERFEQ4G0M1 354 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
PTCH1-203ENST00000375274 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.43e-7■■■■■ 56.2
PTCH1-203ENST00000375274 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 ECEL1O95672 775 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 BPIFB4P59827 614 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 VSNL1P62760 191 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 KAZNQ674X7 775 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 H0YIN7 160 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 PALMO75781 387 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 MMS22LQ6ZRQ5 1243 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
PTCH1-203ENST00000375274 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-203ENST00000375274 SESN3P58005 492 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
PTCH1-203ENST00000375274 LMNB2Q03252 620 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 PSMD6Q15008 389 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 DOK7Q18PE1 504 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms