RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DPEP1P16444 411 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 MAP2K2P36507 400 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L24Q0WX57 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 MCM6Q14566 821 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 ERMNQ8TAM6 284 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 LRRC15Q8TF66 581 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 HAS1Q92839 578 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 IQCDQ96DY2 449 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TMX2Q9Y320 296 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 POTEMA6NI47 508 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 STAT2P52630 851 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 GOLGA8FQ08AF8 430 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 GOLGA8DPQ0D2H9 430 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 PTPN21Q16825 1174 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 TSR1Q2NL82 804 aaKnown RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 Q4G0T1 1027 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 HAUS3Q68CZ6 603 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 SYT10Q6XYQ8 523 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 PAIP2Q9BPZ3 127 aaKnown RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 NUP58Q9BVL2 599 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 KCNMB3Q9NPA1 279 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 MYMKA6NI61 221 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 MEIS2O14770 477 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 PPP1R12AO14974 1030 aaPredicted RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 PLA2G6O60733 806 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 FECHP22830 423 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 CASP14P31944 242 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 CYP2C19P33261 490 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 TGFB2P61812 414 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 GUF1Q8N442 669 aaKnown RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 MB21D1Q8N884 522 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 ERO1AQ96HE7 468 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 FAM20AQ96MK3 541 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 NUP88Q99567 741 aaPredicted RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 EHMT1Q9H9B1 1298 aa9.13□□□□□ -0.95
UBR4-202ENST00000375224 ZNF277Q9NRM2 450 aaPredicted RBP9.13□□□□□ -0.95
UBR4-202ENST00000375224 TRIM49BA6NDI0 452 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 ARHGAP4P98171 946 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 LRRC63Q05C16 580 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 STK4Q13043 487 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CENPPQ6IPU0 288 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 IRF2BP1Q8IU81 584 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 ZNF513Q8N8E2 541 aaPredicted RBP9.12□□□□□ -0.95
UBR4-202ENST00000375224 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CPLX3Q8WVH0 158 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 TSG101Q99816 390 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 PIM2Q9P1W9 311 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 ABCB11O95342 1321 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CLRN2A0PK11 232 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 PIK3CDO00329 1044 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 GYPCP04921 128 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 SREBF1P36956 1147 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 SHROOM1Q2M3G4 852 aaPredicted RBP9.12□□□□□ -0.95
UBR4-202ENST00000375224 CYP26C1Q6V0L0 522 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 FAM160B2Q86V87 743 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
UBR4-202ENST00000375224 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 ZBTB21Q9ULJ3 1066 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 PRR12Q9ULL5 1215 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 KIF13BQ9NQT8 1826 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 COBLO75128 1261 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 KCNA3P22001 575 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CIITAP33076 1130 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CCDC65Q8IXS2 484 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 CRYGNQ8WXF5 182 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 DDX12PQ92771 950 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 TUBGCP2Q9BSJ2 902 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 VEZTQ9HBM0 779 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
UBR4-202ENST00000375224 PES1O00541 588 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 CYP3A4P08684 503 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 MTIF2P46199 727 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 PMS1P54277 932 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 USH1GQ495M9 461 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 FKBP15Q5T1M5 1219 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 ANKRD40Q6AI12 368 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 ABHD10Q9NUJ1 306 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 CNTNAP1P78357 1384 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 FCER1AP12319 257 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 IDEP14735 1019 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 TNIP1Q15025 636 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 DYMQ7RTS9 669 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 KIAA0895Q8NCT3 520 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 JDP2Q8WYK2 163 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 CNOT6LQ96LI5 555 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 SLC39A2Q9NP94 309 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 LUC7L2Q9Y383 392 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 MRPL11Q9Y3B7 192 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 TRIM66O15016 1216 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 KRT9P35527 623 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 ZNF76P36508 570 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 FXR1P51114 621 aaKnown RBP eCLIP9.11□□□□□ -0.959e-7■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms