RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SLC26A6Q9BXS9 759 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SLC28A3Q9HAS3 691 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CHD7Q9P2D1 2997 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 STK36Q9NRP7 1315 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CABYRO75952 493 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MYOGP15173 224 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SCLYQ96I15 445 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ALG1Q9BT22 464 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 RNF26Q9BY78 433 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CYP39A1Q9NYL5 469 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MAD2L2Q9UI95 211 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ATP6V1DQ9Y5K8 247 aa12.56□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 DEXIO95424 95 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 F13A1P00488 732 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FDX1P10109 184 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MRPS5P82675 430 aaKnown RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FUT2Q10981 343 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TKFCQ3LXA3 575 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CMTR1Q8N1G2 835 aaKnown RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CHURC1Q8WUH1 139 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 NECAB3Q96P71 396 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 UHRF1Q96T88 793 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CCPG1Q9ULG6 757 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PRR12Q9ULL5 1215 aa12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-202ENST00000374949 COL4A4P53420 1690 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PRRC2BQ5JSZ5 2229 aaKnown RBP12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ZEB2O60315 1214 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TRIM29Q14134 588 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ZSCAN16Q9H4T2 348 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SLC4A7Q9Y6M7 1214 aa12.54□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SCN10AQ9Y5Y9 1956 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PDHBP11177 359 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CYP2C9P11712 490 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 XBP1P17861 261 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MCM4P33991 863 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FOSBP53539 338 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TTLL4Q14679 1199 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CCDC96Q2M329 555 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ASPRV1Q53RT3 343 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
HLA-DQA1-202ENST00000374949 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PLA2G6O60733 806 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MYL3P08590 195 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SLC16A2P36021 539 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ALDH5A1P51649 535 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TFF2Q03403 129 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SLC30A10Q6XR72 485 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MORC4Q8TE76 937 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 DCAF4Q8WV16 495 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 Q9Y3F1 56 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PCDHA11Q9Y5I1 949 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PTPRSQ13332 1948 aa12.52□□□□□ -0.41
HLA-DQA1-202ENST00000374949 REV3LO60673 3130 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RFXAPO00287 272 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NFIBO00712 420 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ICAM1P05362 532 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CA3P07451 260 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PTMSP20962 102 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 KCNQ1P51787 676 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RESTQ13127 1097 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PKN1Q16512 942 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 KRT40Q6A162 431 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms