RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 LRRC8DQ7L1W4 858 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 SAMD11Q96NU1 681 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 IGFLR1Q9H665 355 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 Q9Y3F1 56 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 LINC01565O15544 149 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 NBNO60934 754 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 SELPP16109 830 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 GTF2F1P35269 517 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA1-201ENST00000374733 IKBKEQ14164 716 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA1-201ENST00000374733 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 RETREG3Q86VR2 466 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 MYOCDQ8IZQ8 938 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 DBNDD2Q9BQY9 259 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 SLC6A16Q9GZN6 736 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
ABCA1-201ENST00000374733 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 EFCAB14O75071 495 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 ZBED4O75132 1171 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 CXCL10P02778 98 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 NDUFV1P49821 464 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 CPT1AP50416 773 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 PTGISQ16647 500 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 ST3GAL2Q16842 350 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 CAGE1Q8TC20 777 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 INCENPQ9NQS7 918 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 LIMD1Q9UGP4 676 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
ABCA1-201ENST00000374733 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
ABCA1-201ENST00000374733 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.37
ABCA1-201ENST00000374733 DUSP28Q4G0W2 176 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 KIAA2013Q8IYS2 634 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 TMEM105Q8N8V8 129 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 OR6J1Q8NGC5 347 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
ABCA1-201ENST00000374733 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
ABCA1-201ENST00000374733 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
ABCA1-201ENST00000374733 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
ABCA1-201ENST00000374733 USP17L12C9JPN9 530 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 USP17L21D6R901 530 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 IGSF3O75054 1194 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 AMHP03971 560 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
ABCA1-201ENST00000374733 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
ABCA1-201ENST00000374733 SDR42E1Q8WUS8 393 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
ABCA1-201ENST00000374733 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
ABCA1-201ENST00000374733 RIPOR3Q96MK2 946 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 MEIS3Q99687 375 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 CRNKL1Q9BZJ0 848 aaKnown RBP12.76□□□□□ -0.37
ABCA1-201ENST00000374733 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
ABCA1-201ENST00000374733 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 CTNNB1P35222 781 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 PTPN11Q06124 597 aaPredicted RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 ZBTB33Q86T24 672 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 KANSL2Q9H9L4 492 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
ABCA1-201ENST00000374733 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
ABCA1-201ENST00000374733 GRM6O15303 877 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 PARNO95453 639 aaKnown RBP12.74□□□□□ -0.37
ABCA1-201ENST00000374733 EYA4O95677 639 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 NDUFB10O96000 172 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 CKBP12277 381 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 ICAM3P32942 547 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
ABCA1-201ENST00000374733 CCDC184Q52MB2 194 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
ABCA1-201ENST00000374733 TNNI3KQ59H18 835 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
ABCA1-201ENST00000374733 SMRP1Q8NCR6 262 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 COL26A1Q96A83 441 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 MSLNLQ96KJ4 702 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
ABCA1-201ENST00000374733 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms