RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 GOLGA8CPA6NN73 597 aa6.87□□□□□ -1.31
PTPN3-202ENST00000374541 PAK1Q13153 545 aa6.87□□□□□ -1.31
PTPN3-202ENST00000374541 HAUS6Q7Z4H7 955 aa6.87□□□□□ -1.31
PTPN3-202ENST00000374541 PPP1R9AQ9ULJ8 1098 aa6.87□□□□□ -1.31
PTPN3-202ENST00000374541 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.87□□□□□ -1.31
PTPN3-202ENST00000374541 ABCC4O15439 1325 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 USP17L21D6R901 530 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 PFDN6O15212 129 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 KRT19P08727 400 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 BCRP11274 1271 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 BMP3P12645 472 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CCT6AP40227 531 aaKnown RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 INPP1P49441 399 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 ZNF445P59923 1031 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 RPAP3Q9H6T3 665 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 TYW1Q9NV66 732 aaKnown RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 BAIAP2L1Q9UHR4 511 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 SLC8A2Q9UPR5 921 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 RGS16O15492 202 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 XPOTO43592 962 aaKnown RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 STAG3L1P0CL83 205 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 STAT3P40763 770 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 PDE1CQ14123 709 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 DIXDC1Q155Q3 683 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 KRT71Q3SY84 523 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 LRCH2Q5VUJ6 765 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 GOLGA5Q8TBA6 731 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 PHKBQ93100 1093 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 KLRG1Q96E93 195 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 MIS12Q9H081 205 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 SEPT10Q9P0V9 454 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 ATXN8OSP0DMR3 200 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 RLBP1P12271 317 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 ERCC3P19447 782 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 MAGEA1P43355 309 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 MMP14P50281 582 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 BIRC3Q13489 604 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 POLA2Q14181 598 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 ZSCAN26Q16670 478 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 NBPF9Q3BBW0 867 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 TRIM58Q8NG06 486 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 KLHDC4Q8TBB5 520 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 STAG1Q8WVM7 1258 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CDHR1Q96JP9 859 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CTTNBP2NLQ9P2B4 639 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 ARHGEF35A5YM69 484 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 XPAP23025 273 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 FANCCQ00597 558 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 DCAF17Q5H9S7 520 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CEP68Q76N32 757 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CCDC124Q96CT7 223 aaKnown RBP6.86□□□□□ -1.31
PTPN3-202ENST00000374541 TUBB6Q9BUF5 446 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 AFG3L2Q9Y4W6 797 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 PCDHB7Q9Y5E2 793 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 SMIM24O75264 130 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 NDUFV1P49821 464 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CPT1AP50416 773 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 STX17P56962 302 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 NLRP12P59046 1061 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 PSMD6Q15008 389 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 MIS18BP1Q6P0N0 1132 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 SHCBP1Q8NEM2 672 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 GSDMBQ8TAX9 411 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 HAUS1Q96CS2 278 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 CARD6Q9BX69 1037 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 RIC8AQ9NPQ8 531 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 IRAK4Q9NWZ3 460 aa6.86□□□□□ -1.31
PTPN3-202ENST00000374541 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CTSHP09668 335 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 POLGP54098 1239 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 NMIQ13287 307 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 SNCBQ16143 134 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 ARMCX5Q6P1M9 558 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 SND1Q7KZF4 910 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CTNND2Q9UQB3 1225 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CEP104O60308 925 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 KRT5P13647 590 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 MAN1A1P33908 653 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 AK2P54819 239 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 COG7P83436 770 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 MDM2Q00987 491 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CREB3L3Q68CJ9 461 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CSGALNACT2Q8N6G5 542 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 IWS1Q96ST2 819 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 LZTS2Q9BRK4 669 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 DAPK3O43293 454 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 MCTP2Q6DN12 878 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 RIOK1Q9BRS2 568 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 RAVER2Q9HCJ3 691 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 POLR3EQ9NVU0 708 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms