RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 RGS20O76081 388 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 MTMR1Q13613 665 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ADALQ6DHV7 355 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 NPLOC4Q8TAT6 608 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 FAM20AQ96MK3 541 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 APBA2Q99767 749 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 KCNH7Q9NS40 1196 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 CUTAO60888 179 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ARP10275 920 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 IL17AQ16552 155 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 GNPTABQ3T906 1256 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ARMCX2Q7L311 632 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 SLFN12Q8IYM2 578 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 GZF1Q9H116 711 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 VWA3AA6NCI4 1184 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 FKTNO75072 461 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 ICAM3P32942 547 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 UBE2HP62256 183 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 CAP1Q01518 475 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 GRIN1Q05586 938 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 SLC5A5Q92911 643 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 CDHR1Q96JP9 859 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 TINF2Q9BSI4 451 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
SMPDL3B-201ENST00000373888 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 GNRH1P01148 92 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 IGHA2P01877 340 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 XRCC5P13010 732 aaKnown RBP16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 TXKP42681 527 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 OLFML2BQ68BL8 750 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 ERO1AQ96HE7 468 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
SMPDL3B-201ENST00000373888 PCNTO95613 3336 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 SPATA31C2B4DYI2 1134 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 MARCH6O60337 910 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 CYP2B6P20813 491 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 LONP1P36776 959 aaKnown RBP16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 TMEM266Q2M3C6 531 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 GJA10Q969M2 543 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 RIT2Q99578 217 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 VTA1Q9NP79 307 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
SMPDL3B-201ENST00000373888 PSMD10O75832 226 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 SNAI1O95863 264 aaPredicted RBP16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 TECP42680 631 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 FLT3LGP49771 235 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 PRKCZQ05513 592 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 IRF5Q13568 498 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 PDIA5Q14554 519 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 LRCH2Q5VUJ6 765 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 AK8Q96MA6 479 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 FLRT1Q9NZU1 646 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
SMPDL3B-201ENST00000373888 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 ATP9AO75110 1047 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 TGFB3P10600 412 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 KCNA2P16389 499 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 CMA1P23946 247 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 HOXD10P28358 340 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 MRE11P49959 708 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 ZNF445P59923 1031 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 ARHGEF6Q15052 776 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 KCNV1Q6PIU1 500 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 SENP7Q9BQF6 1050 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms