RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 MCM7P33993 719 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 HERVK_113P62684 666 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 TRIM14Q14142 442 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 PLS1Q14651 629 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 PSMD1Q99460 953 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 CPVLQ9H3G5 476 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 ATP2C2O75185 946 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 CXCR5P32302 372 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 KRT83P78385 493 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 HDLBPQ00341 1268 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 NNTQ13423 1086 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 FHDC1Q9C0D6 1143 aaPredicted RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 LACRTQ9GZZ8 138 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SMARCAL1Q9NZC9 954 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 ANAPC4Q9UJX5 808 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 NEBLO76041 1014 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 ERCC3P19447 782 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SLC16A2P36021 539 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SPAG1Q07617 926 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SEPT2Q15019 361 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 ZNF174Q15697 407 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 NTRK3Q16288 839 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 PAPD7Q5XG87 772 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 NEDD1Q8NHV4 660 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 SLC24A3Q9HC58 644 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 KLC4Q9NSK0 619 aa12.34□□□□□ -0.43
RPRD1B-201ENST00000373433 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 SEC24CP53992 1094 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 APBA1Q02410 837 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 PAK1Q13153 545 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 USH1GQ495M9 461 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC40Q4G0X9 1142 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 SMCR8Q8TEV9 937 aaPredicted RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC114Q96M63 670 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 RASA1P20936 1047 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 E2F5Q15329 346 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 SH3GL2Q99962 352 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 TRIM21P19474 475 aaKnown RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 FNTAP49354 379 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 MRPL12P52815 198 aaKnown RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 TCP11X2Q5H9J9 407 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 GSDMAQ96QA5 445 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
RPRD1B-201ENST00000373433 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 KIF5AQ12840 1032 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 TRAF1Q13077 416 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 RASA3Q14644 834 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 LETM2Q2VYF4 491 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 EHD2Q9NZN4 543 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 E7EVH7 732 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 FSBPO95073 299 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 FECHP22830 423 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 LSP1P33241 339 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 UBA7P41226 1012 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 NT5C2P49902 561 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 ZIM3Q96PE6 472 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 EPHB4P54760 987 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms