RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 PCDHA1Q9Y5I3 950 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 F5H423 210 aaPredicted RBP9.78□□□□□ -0.84
PTPRT-206ENST00000373198 ARL4AP40617 200 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 UBXN2AP68543 259 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 E2F4Q16254 413 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 AFG1LQ8WV93 481 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 YY1AP1Q9H869 796 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
PTPRT-206ENST00000373198 CFAP69A5D8W1 941 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 MYL3P08590 195 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 MAPK4P31152 587 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 AARS2Q5JTZ9 985 aaKnown RBP9.77□□□□□ -0.84
PTPRT-206ENST00000373198 ZNF532Q9HCE3 1301 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 OSBPL10Q9BXB5 764 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 USP26Q9BXU7 913 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 SCOCQ9UIL1 159 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 CACNA1FO60840 1977 aa9.77□□□□□ -0.84
PTPRT-206ENST00000373198 MSH2P43246 934 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 POLR2FP61218 127 aaKnown RBP9.77□□□□□ -0.85
PTPRT-206ENST00000373198 GRAMD4Q6IC98 578 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 PLA2G4DQ86XP0 818 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 GIPC2Q8TF65 315 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 SMYD3Q9H7B4 428 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 SLC24A3Q9HC58 644 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 MAP3K5Q99683 1374 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 CCDC159P0C7I6 412 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 ALDH1B1P30837 517 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 EHHADHQ08426 723 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 ANGPT1Q15389 498 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 TRIP13Q15645 432 aaPredicted RBP9.77□□□□□ -0.85
PTPRT-206ENST00000373198 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 ING2Q9H160 280 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 SELENONQ9NZV5 590 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.85
PTPRT-206ENST00000373198 TTI1O43156 1089 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 CYTH2Q99418 400 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 RAD18Q9NS91 495 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 ORC4O43929 436 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 CD58P19256 250 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 TRIM42Q8IWZ5 723 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 HEXIM2Q96MH2 286 aaKnown RBP9.77□□□□□ -0.85
PTPRT-206ENST00000373198 SBNO1A3KN83 1393 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 E9PMD0 336 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 PI4K2BG5E9Z4 385 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 HSPA6P17066 643 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 BBOF1Q8ND07 529 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 DYDC2Q96IM9 177 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 EDEM3Q9BZQ6 932 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 TRIM15Q9C019 465 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 ADGRL1O94910 1474 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 THEMIS2Q5TEJ8 643 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 KRT87PA6NCN2 255 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
PTPRT-206ENST00000373198 TRIML1Q8N9V2 468 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 MLKLQ8NB16 471 aa9.77□□□□□ -0.85
PTPRT-206ENST00000373198 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 GRAMD1BQ3KR37 738 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 TEX9Q8N6V9 391 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 MAGOHBQ96A72 148 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 TPCN1Q9ULQ1 816 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 GOLGA8HP0CJ92 632 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 MCF2P10911 925 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 SKIP12755 728 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 FBXO11Q86XK2 927 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 NAF1Q96HR8 494 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 KIFC3Q9BVG8 833 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 FAM49AQ9H0Q0 323 aaPredicted RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 C6orf203Q9P0P8 240 aaPredicted RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 SERPIND1P05546 499 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PRPSAP2O60256 369 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 CCNA1P78396 465 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 DSTYKQ6XUX3 929 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 CHCHD3Q9NX63 227 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 KRT1P04264 644 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 CATSPER3Q86XQ3 398 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 BCAS4Q8TDM0 211 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 STX18Q9P2W9 335 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 GOLGA8KD6RF30 607 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PDXDC1Q6P996 788 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 USP6NLQ92738 828 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 FSD1LQ9BXM9 530 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 UPF3AQ9H1J1 476 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 WARS2Q9UGM6 360 aaKnown RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 DOLKQ9UPQ8 538 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 ARL4DP49703 201 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PTK2Q05397 1052 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 MIS18BP1Q6P0N0 1132 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PLEKHM3Q6ZWE6 761 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 PPARGP37231 505 aaPredicted RBP9.76□□□□□ -0.85
PTPRT-206ENST00000373198 MYO1EQ12965 1108 aa9.76□□□□□ -0.85
PTPRT-206ENST00000373198 TNNI3KQ59H18 835 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms