RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CTDP1Q9Y5B0 961 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CHGBP05060 677 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CXCR5P32302 372 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 FXR1P51114 621 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CCNG1P51959 295 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 ERVK-24P63145 666 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 PACS1Q6VY07 963 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CAVIN3Q969G5 261 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 XPO6Q96QU8 1125 aaKnown RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 NUDCD1Q96RS6 583 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 SH3GL1Q99961 368 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 SELENOSQ9BQE4 189 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 FAM192AQ9GZU8 254 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 PLCB1Q9NQ66 1216 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 PSMD14O00487 310 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 ORC4O43929 436 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 PSMC1P62191 440 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 GSTM4Q03013 218 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 BHMTQ93088 406 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CATSPER2Q96P56 530 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 LBHD1Q9BQE6 289 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 ATP9AO75110 1047 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 MAGOHP61326 146 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 KRT72Q14CN4 511 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 ZNF713Q8N859 430 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 HPS3Q969F9 1004 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 MAGOHBQ96A72 148 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 PPP1R14BQ96C90 147 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 TMBIM4Q9HC24 238 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CNOT8Q9UFF9 292 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 IFIT3O14879 490 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CALB2P22676 271 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CDC27P30260 824 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CDC25AP30304 524 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 STX17P56962 302 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 RNASELQ05823 741 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CLPPQ16740 277 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 OTUD7BQ6GQQ9 843 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 PHLDB3Q6NSJ2 640 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 SPATA4Q8NEY3 305 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 DNAJC1Q96KC8 554 aaKnown RBP11.62□□□□□ -0.55
TRERF1-203ENST00000372917 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 PCDHA5Q9Y5H7 936 aa11.62□□□□□ -0.55
TRERF1-203ENST00000372917 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 SKIP12755 728 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 ACADSP16219 412 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 PAFAH1B1P43034 410 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 DNA2P51530 1060 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 USP11P51784 963 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 FMR1Q06787 632 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 NR1I3Q14994 352 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 PAPD7Q5XG87 772 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 MPP4Q96JB8 637 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 SPATA16Q9BXB7 569 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 EXOC1Q9NV70 894 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 EHD2Q9NZN4 543 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 NVLO15381 856 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 PRC1O43663 620 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 GSTT2P0CG29 244 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 GSTT2BP0CG30 244 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 RARAP10276 462 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 PMS2P54278 862 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 NMD3Q96D46 503 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 EYA1Q99502 592 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 RNPEPL1Q9HAU8 725 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 KCNMB3Q9NPA1 279 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 SHBGP04278 402 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 ASLP04424 464 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CTNNA1P35221 906 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CCT6AP40227 531 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 PTDSS1P48651 473 aaKnown RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 INAQ16352 499 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 FXNQ16595 210 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 ZC2HC1CQ53FD0 456 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 MMGT1Q8N4V1 131 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CEP70Q8NHQ1 597 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 NELFBQ8WX92 580 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CASP10Q92851 521 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-203ENST00000372917 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 MKS1Q9NXB0 559 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 SLC12A6Q9UHW9 1150 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 CRB1P82279 1406 aa11.61□□□□□ -0.55
TRERF1-203ENST00000372917 KRT86O43790 486 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms