RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 CELF3Q5SZQ8 465 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 MYLIPQ8WY64 445 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 SEZ6LQ9BYH1 1024 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 HDAC6Q9UBN7 1215 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 TRANK1O15050 2925 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 F2P00734 622 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 FGBP02675 491 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 CDC27P30260 824 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 CCND2P30279 289 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 KIF5BP33176 963 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 PSEN2P49810 448 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 LAMC2Q13753 1193 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 UBE2SQ16763 222 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 SESTD1Q86VW0 696 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 INPP4AQ96PE3 977 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 C16orf70Q9BSU1 422 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 YBX2Q9Y2T7 364 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
EXOSC1-202ENST00000370885 PTPRSQ13332 1948 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 SPATA31C2B4DYI2 1134 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 ATP9AO75110 1047 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 IQCF3P0C7M6 154 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 SUPT20HL2P0C7V6 817 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 MYOGP15173 224 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 ICAM3P32942 547 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 RABGGTBP53611 331 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 PTGISQ16647 500 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 DGKDQ16760 1214 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 TRIM71Q2Q1W2 868 aaKnown RBP12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 TRAF7Q6Q0C0 670 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 DEFB128Q7Z7B8 93 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 SPATA33Q96N06 139 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 GTF2IRD1Q9UHL9 959 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
EXOSC1-202ENST00000370885 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 CALM1P0DP23 149 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 CALM2P0DP24 149 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 CALM3P0DP25 149 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 ITGB5P18084 799 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 HSPA4P34932 840 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 GNAQP50148 359 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 MFSD10Q14728 455 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 KIAA0753Q2KHM9 967 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 SLC17A8Q8NDX2 589 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
EXOSC1-202ENST00000370885 MYO9BQ13459 2157 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 TGFB3P10600 412 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 TRAF1Q13077 416 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 MBTPS1Q14703 1052 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 KCNV1Q6PIU1 500 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 CYFIP1Q7L576 1253 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 TRIM50Q86XT4 487 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 NKX2-4Q9H2Z4 354 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
EXOSC1-202ENST00000370885 ZBTB43O43298 467 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 NBNO60934 754 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 LGALS2P05162 132 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 HOXC8P31273 242 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 RTN1Q16799 776 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 Q6ZUG5 572 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 CYP2W1Q8TAV3 490 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 GPR20Q99678 358 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 MLXIPQ9HAP2 919 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms