RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 KCNH4Q9UQ05 1017 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 EFR3BQ9Y2G0 817 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 FAM205AQ6ZU69 1335 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 C3orf80F5H4A9 247 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 APBA3O96018 575 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 A1BGP04217 495 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 IL1R1P14778 569 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 IL4RP24394 825 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 SSR1P43307 286 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 PLA2G4AP47712 749 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CHMP4BP1P59074 171 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 PPP4R4Q6NUP7 873 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 RABGGTAQ92696 567 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 DPF3Q92784 378 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 LMAN2LQ9H0V9 348 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 ANLNQ9NQW6 1124 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 ECHDC1Q9NTX5 307 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 COG5Q9UP83 839 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 NOSIPQ9Y314 301 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 F5H0A9 414 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 NPHP1O15259 732 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 ADCY3O60266 1144 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 ASMTLO95671 621 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 FAM160A1Q05DH4 1040 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 SUSD4Q5VX71 490 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 PCNX4Q63HM2 1172 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 C16orf71Q8IYS4 520 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 NACC2Q96BF6 587 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CLUHP3Q96NS8 147 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CRAMP1Q96RY5 1269 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CCDC94Q9BW85 323 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 LSM14BQ9BX40 385 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 TRPV5Q9NQA5 729 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 MYO3BQ8WXR4 1341 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 FAM170AA1A519 330 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 SPTLC2O15270 562 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 NCAM2O15394 837 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SGTAO43765 313 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 EVI5O60447 810 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 MPSTP25325 297 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 HOXC12P31275 282 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 NASPP49321 788 aaPredicted RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 CSE1LP55060 971 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 MAP3K9P80192 1104 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SLC14A2Q15849 920 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SLC4A8Q2Y0W8 1093 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SPDYCQ5MJ68 293 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 TLDC1Q6P9B6 456 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 FASTKD5Q7L8L6 764 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 CATSPER4Q7RTX7 472 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 CARNMT1Q8N4J0 409 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 FNIP1Q8TF40 1166 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 ZNF75CPQ92670 426 aaPredicted RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 ALPK1Q96QP1 1244 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 RXFP3Q9NSD7 469 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 USP21Q9UK80 565 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 VSTM5A8MXK1 200 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 CYP17A1P05093 508 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 COX10Q12887 443 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 ODF1Q14990 250 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 UBE3CQ15386 1083 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 EP400NLQ6ZTU2 488 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SMARCC2Q8TAQ2 1214 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 USP33Q8TEY7 942 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 ZNF384Q8TF68 577 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 FRAT1Q92837 279 aaPredicted RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 KATNAL1Q9BW62 490 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 NT5C1AQ9BXI3 368 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 DBNDD1Q9H9R9 158 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 HCN4Q9Y3Q4 1203 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 ATRNL1Q5VV63 1379 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 GAKO14976 1311 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 LTBP3Q9NS15 1303 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 ERC2O15083 957 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 TAF5LO75529 589 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 MCM2P49736 904 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SNX16P57768 344 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 RABEP1Q15276 862 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 DAAM2Q86T65 1068 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 TTC5Q8N0Z6 440 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 SLAIN1Q8ND83 568 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 RHOVQ96L33 236 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 MMTAG2Q9BU76 263 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 RSRP1Q9BUV0 290 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 RPAP3Q9H6T3 665 aaPredicted RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 NEUROD4Q9HD90 331 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 HMG20BQ9P0W2 317 aa4.47□□□□□ -1.69
MCF2-203ENST00000370576 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
MCF2-203ENST00000370576 PLXNB2O15031 1838 aa4.46□□□□□ -1.7
MCF2-203ENST00000370576 BHMG1C9JSJ3 638 aaPredicted RBP4.46□□□□□ -1.7
MCF2-203ENST00000370576 ANO1Q5XXA6 986 aa4.46□□□□□ -1.7
MCF2-203ENST00000370576 RETSATQ6NUM9 610 aa4.46□□□□□ -1.7
MCF2-203ENST00000370576 BEND5Q7L4P6 421 aa4.46□□□□□ -1.7
MCF2-203ENST00000370576 ZNF396Q96N95 335 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms