RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 STAMBPL1Q96FJ0 436 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 TRIM51Q9BSJ1 452 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 DDX20Q9UHI6 824 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 MYH10P35580 1976 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 GRIN2DO15399 1336 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 SPDYE3A6NKU9 549 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 HMGB1P1B2RPK0 211 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 H0Y3Z8 333 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 IL17AQ16552 155 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 KRT79Q5XKE5 535 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 INTS9Q9NV88 658 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 NFAT5O94916 1531 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 SMCO2A6NFE2 343 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 POTEMA6NI47 508 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 HSD17B3P37058 310 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 DHTKD1Q96HY7 919 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 TBK1Q9UHD2 729 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 TTI1O43156 1089 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 SART1O43290 800 aaKnown RBP11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 PDE8AO60658 829 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 MMEP08473 750 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 SPATS2Q86XZ4 545 aaKnown RBP11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 CCDC26Q8TAB7 109 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 FER1L4A9Z1Z3 1794 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 MPHOSPH10O00566 681 aaKnown RBP11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 PDHA1P08559 390 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 ACTN1P12814 892 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 SLC8A1P32418 973 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 PPP2R2AP63151 447 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 RAPGEF5Q92565 580 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 KLHL29Q96CT2 875 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 VCPKMTQ9H867 229 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 KIF9Q9HAQ2 790 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 MYH8P13535 1937 aa11.41□□□□□ -0.58
PRPF38B-201ENST00000370021 A0A1W2PQC6 194 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 DCDC2CA8MYV0 355 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 NLRP10Q86W26 655 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 CHORDC1Q9UHD1 332 aaPredicted RBP11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 OR52Z1P0C646 297 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 SCTRP47872 440 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 SMTNP53814 917 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 MAN2A1Q16706 1144 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 ARHGAP44Q17R89 818 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 FAM83BQ5T0W9 1011 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 CAPN12Q6ZSI9 719 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 FUKQ8N0W3 1084 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 ACSBG1Q96GR2 724 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 SGSM3Q96HU1 749 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 DNM1LO00429 736 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 TTI2Q6NXR4 508 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 MIEF2Q96C03 454 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 ZBTB10Q96DT7 871 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 LEMD3Q9Y2U8 911 aa11.4□□□□□ -0.58
PRPF38B-201ENST00000370021 PDS5AQ29RF7 1337 aaKnown RBP11.4□□□□□ -0.59
PRPF38B-201ENST00000370021 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.59
PRPF38B-201ENST00000370021 A0A087X0T9 212 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 LRRC10BA6NIK2 292 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 CPP00450 1065 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 FGGP02679 453 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 FAM228BP0C875 321 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 ITGA4P13612 1032 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 GJC1P36383 396 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 DENND2CQ68D51 928 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 FAM47EQ6ZV65 393 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 CCDC50Q8IVM0 306 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 WHAMMQ8TF30 809 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 DUSP9Q99956 384 aaKnown RBP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 TRIM9Q9C026 710 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 NOD2Q9HC29 1040 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 WDR19Q8NEZ3 1342 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 VSIG1Q86XK7 387 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms