RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GUF1Q8N442 669 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 KCTD17Q8N5Z5 321 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 AGBL3Q8NEM8 1001 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 CEP63Q96MT8 703 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 GINM1Q9NU53 330 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 HPSEQ9Y251 543 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 SAR1BQ9Y6B6 198 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP54Q70EL1 1684 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ROBO1Q9Y6N7 1651 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 SPEF2Q9C093 1822 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM205CA6NFA0 338 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 POTEMA6NI47 508 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 OPA1O60313 960 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 ZSCAN20P17040 1043 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 HOXA13P31271 388 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 PRCPP42785 496 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 KCNJ6P48051 423 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 CYP2J2P51589 502 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 HDXQ7Z353 690 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 GPR161Q8N6U8 529 aaKnown RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 MB21D1Q8N884 522 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 DEPTORQ8TB45 409 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 LPAR1Q92633 364 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 RNF216Q9NWF9 866 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 MTUS1Q9ULD2 1270 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 BCL9LQ86UU0 1499 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 ACTN4O43707 911 aaKnown RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 MFAP3LO75121 409 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 NDUFB10O96000 172 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 AFPP02771 609 aaKnown RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 RHOXF2BP0C7M4 288 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 MYZAPP0CAP1 466 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 RPS12P25398 132 aaKnown RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 CTNNA2P26232 953 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 DPYDQ12882 1025 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 PPP2R5AQ15172 486 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 RHOXF2Q9BQY4 288 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 FUCA2Q9BTY2 467 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 NDST4Q9H3R1 872 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 SYNCQ9H7C4 482 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 TBC1D22BQ9NU19 505 aa5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF70Q9UC06 446 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-202ENST00000369603 TDP2O95551 362 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 CAPN2P17655 700 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 TCP1P17987 556 aaKnown RBP5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 TM4SF1P30408 202 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 IREB2P48200 963 aaKnown RBP5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 PRELPP51888 382 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 JAK3P52333 1124 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 POLR2FP61218 127 aaKnown RBP5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 DDR1Q08345 913 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 CRY2Q49AN0 593 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 CFAP221Q4G0U5 840 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM160B1Q5W0V3 765 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 ARMCX5Q6P1M9 558 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 EXOC8Q8IYI6 725 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC26Q8TAB7 109 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 SMCR8Q8TEV9 937 aaPredicted RBP5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 GJA10Q969M2 543 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 ACCSQ96QU6 501 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 MLXIPQ9HAP2 919 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC5A4Q9NY91 659 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 RGPD5Q99666 1765 aa5.84□□□□□ -1.48
SMNDC1-202ENST00000369603 GSTTP1A0A1W2PQM5 241 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FOXN1O15353 648 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 KRT5P13647 590 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 ERCC3P19447 782 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 LRRC41Q15345 812 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 SEPT7Q16181 437 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 TTBK2Q6IQ55 1244 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RNF207Q6ZRF8 634 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM186BQ8IYM0 893 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 UBL4BQ8N7F7 174 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 GLG1Q92896 1179 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 C7orf25Q9BPX7 421 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 JPH2Q9BR39 696 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 MRIQ9BWK5 157 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 TRIM9Q9C026 710 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 VPS33BQ9H267 617 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RASSF4Q9H2L5 321 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 JMJD4Q9H9V9 463 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM217BQ9NTX9 383 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 HOXC10Q9NYD6 342 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 SEL1LQ9UBV2 794 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FBXO40Q9UH90 709 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 A0A1W2PQC6 194 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 SHTN1A0MZ66 631 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 KIAA0754O94854 1291 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RHOBTB3O94955 611 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 ZBTB7AO95365 584 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FERP16591 822 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 UBXN2AP68543 259 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CCNA1P78396 465 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms