RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CDC37Q16543 378 aaPredicted RBP19.22■□□□□ 0.67
CHTOP-203ENST00000368690 GALNT17Q6IS24 598 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 SDR42E1Q8WUS8 393 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 P3H4Q92791 437 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 TRIM9Q9C026 710 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 TMBIM4Q9HC24 238 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 COL4A1P02462 1669 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 M0R2N6 131 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 CES2O00748 559 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 FGFR1OPO95684 399 aaKnown RBP19.22■□□□□ 0.67
CHTOP-203ENST00000368690 FAM153BP0C7A2 387 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 MYBP10242 640 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 PDE4DQ08499 809 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 FAM153CQ494X1 144 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 CENPPQ6IPU0 288 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 ARMC9Q7Z3E5 817 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 DAGLBQ8NCG7 672 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 FLAD1Q8NFF5 587 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 NUCKS1Q9H1E3 243 aaKnown RBP19.22■□□□□ 0.67
CHTOP-203ENST00000368690 NDST4Q9H3R1 872 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 FAM153AQ9UHL3 310 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 TM4SF1P30408 202 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 KIF5BP33176 963 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
CHTOP-203ENST00000368690 GUCY2DQ02846 1103 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 MAN2A1Q16706 1144 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 RNF187Q5TA31 235 aaPredicted RBP19.21■□□□□ 0.67
CHTOP-203ENST00000368690 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 DEFB132Q7Z7B7 95 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 BAP1Q92560 729 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 RIOK1Q9BRS2 568 aaKnown RBP19.21■□□□□ 0.67
CHTOP-203ENST00000368690 LUC7LQ9NQ29 371 aaKnown RBP19.21■□□□□ 0.67
CHTOP-203ENST00000368690 SMARCAL1Q9NZC9 954 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 EHD2Q9NZN4 543 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 SALL4Q9UJQ4 1053 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 SUFUQ9UMX1 484 aa19.21■□□□□ 0.67
CHTOP-203ENST00000368690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHTOP-203ENST00000368690 GOLGA6L10A6NI86 522 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 BAG6P46379 1132 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 CDR1P51861 262 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 MRPS25P82663 173 aaKnown RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 AMPD3Q01432 767 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 PAXIP1Q6ZW49 1069 aaPredicted RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 SYN2Q92777 582 aaPredicted RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 MTMR8Q96EF0 704 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 CYFIP2Q96F07 1278 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 SLC40A1Q9NP59 571 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 FLT1P17948 1338 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 CLGNO14967 610 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 NCK2O43639 380 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 RPS8P62241 208 aaKnown RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 STK4Q13043 487 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 IFT88Q13099 833 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 BIRC3Q13489 604 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 PDXDC1Q6P996 788 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 CCDC121Q6ZUS5 278 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 CASKIN2Q8WXE0 1202 aa19.2■□□□□ 0.66
CHTOP-203ENST00000368690 RPGRQ92834 1020 aaKnown RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
CHTOP-203ENST00000368690 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
CHTOP-203ENST00000368690 ELF1P32519 619 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 CEP85LQ5SZL2 805 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 ADGRA1Q86SQ6 560 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 PSMB7Q99436 277 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 CD248Q9HCU0 757 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 STK32BQ9NY57 414 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 BAZ2AQ9UIF9 1905 aaKnown RBP19.19■□□□□ 0.66
CHTOP-203ENST00000368690 FAM205AQ6ZU69 1335 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 CCDC194A0A1B0GVG4 234 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 GMNCA6NCL1 334 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 LRRC53A6NM62 1247 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 E7EVH7 732 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 EPHB6O15197 1021 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 PAEPP09466 180 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 BCAMP50895 628 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 TNNC1P63316 161 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 IFT81Q8WYA0 676 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 INPP4AQ96PE3 977 aaPredicted RBP19.19■□□□□ 0.66
CHTOP-203ENST00000368690 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 TMEM60Q9H2L4 133 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 PLAAQ9Y263 795 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 CACNA1SQ13698 1873 aa19.19■□□□□ 0.66
CHTOP-203ENST00000368690 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
CHTOP-203ENST00000368690 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 C5orf60A6NFR6 353 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 PP2D1A8MPX8 630 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 ADAMTS3O15072 1205 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 NT5C2P49902 561 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 MRPL12P52815 198 aaKnown RBP19.18■□□□□ 0.66
CHTOP-203ENST00000368690 SEC24CP53992 1094 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 IFFO1Q0D2I5 559 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 CUL1Q13616 776 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 RRAGAQ7L523 313 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 MS4A14Q96JA4 679 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms