RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 COPS5Q92905 334 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 JADE2Q9NQC1 790 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 DDX20Q9UHI6 824 aaKnown RBP15.81■□□□□ 0.12
TPM3-211ENST00000368531 MTMR6Q9Y217 621 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 ARP10275 920 aa15.8■□□□□ 0.12
TPM3-211ENST00000368531 U2AF2P26368 475 aaKnown RBP eCLIP15.8■□□□□ 0.125e-7■■■■□ 22.9
TPM3-211ENST00000368531 MTMR1Q13613 665 aa15.8■□□□□ 0.12
TPM3-211ENST00000368531 CEP55Q53EZ4 464 aa15.8■□□□□ 0.12
TPM3-211ENST00000368531 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
TPM3-211ENST00000368531 RBM47A0AV96 593 aaKnown RBP15.79■□□□□ 0.12
TPM3-211ENST00000368531 SPATA31C2B4DYI2 1134 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 WNT7AO00755 349 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 FIBPO43427 364 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 CCNT1O60563 726 aaKnown RBP15.79■□□□□ 0.12
TPM3-211ENST00000368531 RARBP10826 455 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 SP2Q02086 613 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 SEMA3FQ13275 785 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 PKP1Q13835 747 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 ABHD8Q96I13 439 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
TPM3-211ENST00000368531 DDX41Q9UJV9 622 aaKnown RBP15.79■□□□□ 0.12
TPM3-211ENST00000368531 NOL7Q9UMY1 257 aaKnown RBP15.79■□□□□ 0.12
TPM3-211ENST00000368531 IGLV3-22A0A075B6J6 115 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 MEIS1O00470 390 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 DYNC1LI2O43237 492 aaPredicted RBP15.78■□□□□ 0.12
TPM3-211ENST00000368531 ATP9AO75110 1047 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 PGK1P00558 417 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 CIITAP33076 1130 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 MCM7P33993 719 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 IRX5P78411 483 aaPredicted RBP15.78■□□□□ 0.12
TPM3-211ENST00000368531 NBR1Q14596 966 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 ZNF174Q15697 407 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 KCNV1Q6PIU1 500 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 OR6J1Q8NGC5 347 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 GPRASP2Q96D09 838 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 BCAS3Q9H6U6 928 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 XPNPEP3Q9NQH7 507 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
TPM3-211ENST00000368531 KCNH7Q9NS40 1196 aa15.78■□□□□ 0.12
TPM3-211ENST00000368531 DDX25Q9UHL0 483 aaKnown RBP15.78■□□□□ 0.12
TPM3-211ENST00000368531 CCDC85CA6NKD9 419 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 DDX39AO00148 427 aaKnown RBP15.77■□□□□ 0.12
TPM3-211ENST00000368531 SLC37A4O43826 429 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 MSCO60682 206 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 DUSP11O75319 330 aaKnown RBP15.77■□□□□ 0.12
TPM3-211ENST00000368531 GGPS1O95749 300 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
TPM3-211ENST00000368531 ICAM3P32942 547 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 SP4Q02446 784 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 RESTQ13127 1097 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 TTC38Q5R3I4 469 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 LHX8Q68G74 356 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 TLK2Q86UE8 772 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 GJA10Q969M2 543 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 MLXIPQ9HAP2 919 aa15.77■□□□□ 0.12
TPM3-211ENST00000368531 AGO4Q9HCK5 861 aaKnown RBP15.77■□□□□ 0.12
TPM3-211ENST00000368531 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
TPM3-211ENST00000368531 CYP3A7-CYP3A51PA0A087WV96 503 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 MARCH6O60337 910 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 GH1P01241 217 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 GJB1P08034 283 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 C6orf222P0C671 652 aaPredicted RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 TGFB3P10600 412 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 UBA1P22314 1058 aaKnown RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 CYP3A7P24462 503 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 TOB1P50616 345 aaPredicted RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 BEX3Q00994 111 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 CYFIP1Q7L576 1253 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 U2AF1L4Q8WU68 220 aaKnown RBP15.76■□□□□ 0.11
TPM3-211ENST00000368531 LENG9Q96B70 501 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 CDHR1Q96JP9 859 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 ZNF577Q9BSK1 485 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
TPM3-211ENST00000368531 SYNRGQ9UMZ2 1314 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 NKRFO15226 690 aaKnown RBP eCLIP15.75■□□□□ 0.11
TPM3-211ENST00000368531 MSH4O15457 936 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 MAFGO15525 162 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 SGPL1O95470 568 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
TPM3-211ENST00000368531 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
TPM3-211ENST00000368531 KCNA2P16389 499 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
TPM3-211ENST00000368531 ARHGAP1Q07960 439 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 Q4G0T1 1027 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 CELF3Q5SZQ8 465 aaKnown RBP15.75■□□□□ 0.11
TPM3-211ENST00000368531 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 BRAPQ7Z569 592 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
TPM3-211ENST00000368531 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms