RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 PRR33A8MZF0 331 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 M0R082 166 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 POLR3DP05423 398 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 PDE1AP54750 535 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 CCDC173Q0VFZ6 552 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 PPIL2Q13356 520 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 DLGAP5Q15398 846 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 CFAP100Q494V2 611 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 ZNF417Q8TAU3 575 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 NUDT8Q8WV74 236 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 TRIM43Q96BQ3 446 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 ZNF587Q96SQ5 575 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 OSMRQ99650 979 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 LPIN3Q9BQK8 851 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 PBX4Q9BYU1 374 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 TMEM39BQ9GZU3 492 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 JPH1Q9HDC5 661 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-202ENST00000368289 SMG1Q96Q15 3661 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 MAST2Q6P0Q8 1798 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 GIPC1O14908 333 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 GADD45BO75293 160 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 MBD3O95983 291 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 ZNF445P59923 1031 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 KIAA0319Q5VV43 1072 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 TTLL5Q6EMB2 1281 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 C20orf204Q6ZNR8 217 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 TICAM2Q86XR7 235 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 ERO1BQ86YB8 467 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 TMEM102Q8N9M5 508 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 TRIB2Q92519 343 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 NPHS2Q9NP85 383 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 DZANK1Q9NVP4 752 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 NAGPAQ9UK23 515 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 MKL2Q9ULH7 1088 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 STARD13Q9Y3M8 1113 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 SPEGQ15772 3267 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 MYO3BQ8WXR4 1341 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 SALL3Q9BXA9 1300 aa7.67□□□□□ -1.18
ECHDC1-202ENST00000368289 GRXCR1A8MXD5 290 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 BAG4O95429 457 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 ALBP02768 609 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 HMGCRP04035 888 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 MX1P20591 662 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 MMP14P50281 582 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 ERC1Q8IUD2 1116 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 BEND7Q8N7W2 519 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 SSH3Q8TE77 659 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 TIFAQ96CG3 184 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 TRIM44Q96DX7 344 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 MEIS3Q99687 375 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 EHD4Q9H223 541 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 RASSF4Q9H2L5 321 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 XDHP47989 1333 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 MED23Q9ULK4 1368 aa7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 EP300Q09472 2414 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-202ENST00000368289 A0A1W2PP55 124 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 PDE2AO00408 941 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 TNPO2O14787 897 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 UBTFL1P0CB47 393 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 PTPRAP18433 802 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 CUL4AQ13619 759 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 TTC41PQ6P2S7 1318 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 RUFY2Q8WXA3 655 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 SYAP1Q96A49 352 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 KIF1BPQ96EK5 621 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 PPP1R9BQ96SB3 815 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 ZKSCAN3Q9BRR0 538 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 ISCA1Q9BUE6 129 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 MUC3BQ9H195 1237 aa7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 ALG13Q9NP73 1137 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 ZNF70Q9UC06 446 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 DDX49Q9Y6V7 483 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-202ENST00000368289 CEP250Q9BV73 2442 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 F8W031 263 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 HIP1O00291 1037 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 WDHD1O75717 1129 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 ALDH1L1O75891 902 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 LETM1O95202 739 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 CCND3P30281 292 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 MCM5P33992 734 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 DGKGP49619 791 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 TERF1P54274 439 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 RTP1P59025 263 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 ATP11AP98196 1134 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 MTX1Q13505 466 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 PEAR1Q5VY43 1037 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 SLC4A10Q6U841 1118 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 COPS6Q7L5N1 327 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 PRSS33Q8NF86 280 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 SENP6Q9GZR1 1112 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 COA1Q9GZY4 146 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms