RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RANBP2P49792 3224 aaKnown RBP27.43■■□□□ 1.98
PFDN2-201ENST00000368010 SMCO2A6NFE2 343 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 SPATA31C2B4DYI2 1134 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 PRPF3O43395 683 aaKnown RBP27.43■■□□□ 1.98
PFDN2-201ENST00000368010 TIMP1P01033 207 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 SP2Q02086 613 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 NTRK3Q16288 839 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 NBPF20Q3BBV1 942 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 FAM47CQ5HY64 1035 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 NLRX1Q86UT6 975 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 PHKBQ93100 1093 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 ZNF274Q96GC6 653 aaPredicted RBP27.43■■□□□ 1.98
PFDN2-201ENST00000368010 SPATA33Q96N06 139 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 RNF26Q9BY78 433 aaPredicted RBP27.43■■□□□ 1.98
PFDN2-201ENST00000368010 MLXIPQ9HAP2 919 aa27.43■■□□□ 1.98
PFDN2-201ENST00000368010 NCOA5Q9HCD5 579 aaKnown RBP27.43■■□□□ 1.98
PFDN2-201ENST00000368010 SORBS3O60504 671 aa27.42■■□□□ 1.98
PFDN2-201ENST00000368010 B4GALT4O60513 344 aa27.42■■□□□ 1.98
PFDN2-201ENST00000368010 IFNAR1P17181 557 aa27.42■■□□□ 1.98
PFDN2-201ENST00000368010 NFRKBQ6P4R8 1299 aa27.42■■□□□ 1.98
PFDN2-201ENST00000368010 TRPV6Q9H1D0 765 aa27.42■■□□□ 1.98
PFDN2-201ENST00000368010 FOSP01100 380 aaPredicted RBP27.41■■□□□ 1.98
PFDN2-201ENST00000368010 FPGSQ05932 587 aa27.41■■□□□ 1.98
PFDN2-201ENST00000368010 PTPN11Q06124 597 aaPredicted RBP27.41■■□□□ 1.98
PFDN2-201ENST00000368010 NEDD9Q14511 834 aa27.41■■□□□ 1.98
PFDN2-201ENST00000368010 CCDC12Q8WUD4 166 aaPredicted RBP27.41■■□□□ 1.98
PFDN2-201ENST00000368010 SLC26A6Q9BXS9 759 aa27.41■■□□□ 1.98
PFDN2-201ENST00000368010 PPP1R12CQ9BZL4 782 aa27.41■■□□□ 1.98
PFDN2-201ENST00000368010 SCN10AQ9Y5Y9 1956 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 SUPT20HL2P0C7V6 817 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 CHMP4BP1P59074 171 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 SEMA3FQ13275 785 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 AP3B2Q13367 1082 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 PKN1Q16512 942 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 HSDL1Q3SXM5 330 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 LRIT3Q3SXY7 679 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 GPRASP2Q96D09 838 aa27.4■■□□□ 1.98
PFDN2-201ENST00000368010 LARP6Q9BRS8 491 aaKnown RBP27.4■■□□□ 1.98
PFDN2-201ENST00000368010 ESYT2A0FGR8 921 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 CPLX1O14810 134 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 PPFIA4O75335 1185 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 HOXD8P13378 290 aaPredicted RBP27.39■■□□□ 1.98
PFDN2-201ENST00000368010 MFSD5Q6N075 450 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 METTL7BQ6UX53 244 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 KAT2BQ92831 832 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 CDHR1Q96JP9 859 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 KATNAL1Q9BW62 490 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 HIPK3Q9H422 1215 aa27.39■■□□□ 1.98
PFDN2-201ENST00000368010 TRMT13Q9NUP7 481 aaKnown RBP27.39■■□□□ 1.98
PFDN2-201ENST00000368010 PPFIA3O75145 1194 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 SLC34A2O95436 690 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 F2P00734 622 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 CPLX2Q6PUV4 134 aaKnown RBP27.38■■□□□ 1.97
PFDN2-201ENST00000368010 TRIM22Q8IYM9 498 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 TMEM199Q8N511 208 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 PPP1R13LQ8WUF5 828 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 SENP7Q9BQF6 1050 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 ANO3Q9BYT9 981 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 C6orf50Q9HD87 102 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 UBIAD1Q9Y5Z9 338 aa27.38■■□□□ 1.97
PFDN2-201ENST00000368010 NOP56O00567 594 aaKnown RBP27.37■■□□□ 1.97
PFDN2-201ENST00000368010 SEC24BO95487 1268 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 ZNF286BP0CG31 522 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 ITGB5P18084 799 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 CLK2P49760 499 aaKnown RBP27.37■■□□□ 1.97
PFDN2-201ENST00000368010 STK3Q13188 491 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 GIMAP8Q8ND71 665 aaPredicted RBP27.37■■□□□ 1.97
PFDN2-201ENST00000368010 IL17RAQ96F46 866 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 PGBD1Q96JS3 809 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 ZMYND12Q9H0C1 365 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 TMEM260Q9NX78 707 aa27.37■■□□□ 1.97
PFDN2-201ENST00000368010 SOX1O00570 391 aaPredicted RBP27.36■■□□□ 1.97
PFDN2-201ENST00000368010 PSEN2P49810 448 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 MTMR1Q13613 665 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 ANKRD1Q15327 319 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 SHHQ15465 462 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 C9orf50Q5SZB4 431 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 CYFIP1Q7L576 1253 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 SESTD1Q86VW0 696 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 CCDC148Q8NFR7 591 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 NOC4LQ9BVI4 516 aaKnown RBP27.36■■□□□ 1.97
PFDN2-201ENST00000368010 JADE2Q9NQC1 790 aa27.36■■□□□ 1.97
PFDN2-201ENST00000368010 GNA11P29992 359 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 CYP2C18P33260 490 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 EPHB4P54760 987 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 SSRP1Q08945 709 aaKnown RBP27.35■■□□□ 1.97
PFDN2-201ENST00000368010 PPIGQ13427 754 aaKnown RBP eCLIP27.35■■□□□ 1.975e-7■■■■□ 25.7
PFDN2-201ENST00000368010 MFSD10Q14728 455 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 MCTP2Q6DN12 878 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 BCAS3Q9H6U6 928 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 NOD1Q9Y239 953 aa27.35■■□□□ 1.97
PFDN2-201ENST00000368010 MAFGO15525 162 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 CYP2C9P11712 490 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 SREBF1P36956 1147 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 JAKMIP3Q5VZ66 844 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 REXO1Q8N1G1 1221 aaKnown RBP27.34■■□□□ 1.97
PFDN2-201ENST00000368010 C7orf31Q8N865 590 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 ALG1Q9BT22 464 aa27.34■■□□□ 1.97
PFDN2-201ENST00000368010 SLKQ9H2G2 1235 aaPredicted RBP27.34■■□□□ 1.97
PFDN2-201ENST00000368010 UMODL1Q5DID0 1318 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms